Corticium candelabrum: 134196069
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Entry
134196069 CDS
T11492
Name
(RefSeq) TNF receptor-associated factor 5-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cclm Corticium candelabrum
Pathway
cclm04137
Mitophagy - animal
cclm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134196069
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134196069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclm03019
]
134196069
04121 Ubiquitin system [BR:
cclm04121
]
134196069
Enzymes [BR:
cclm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134196069
Messenger RNA biogenesis [BR:
cclm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134196069
Ubiquitin system [BR:
cclm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
134196069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
TRAF-mep_MATH
zf-TRAF
Sina_ZnF
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
134196069
NCBI-ProteinID:
XP_062521135
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All DBs
Position
20:2415591..2416820
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AA seq
367 aa
AA seq
DB search
MGNLNKSTDFFPDNALKRRLLGLHVRCKNREEGCDWIGELRAVKNHIKKICKFVFKQCPL
VCGKRVKRHQIESHVQNECQLRSVKCEHCRKEVKYLLMKNHTPVCPRFPVSCVFQCGQTL
PREEMKVHVDKQGTCPTALLKCDCREVGCEFKGTRSELEEHYRANVHKHLMLAMVEVRKE
KERVRNLESNFTSSQSSLATTKEDKEKIRSLELQLETVRRSLTTTRQELMEMKQFVYVWK
IDSLSRQSKQSQINSSSFYTGKPGYKLHLRFYPNKGQSHAGLYLNIDRGDYDSLLQWPFS
HCFTMSVLEQKVNGKHISYRVAAPGGSLATPGTFCGSRKFISKEVLSQECYTKNDTLFIK
LVVDMND
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctaaacaagtcgactgacttttttccggacaacgccctcaaacgtcgtctc
ttgggtttgcatgtgagatgcaagaaccgtgaagaaggatgcgattggattggtgaacta
cgtgctgttaaaaatcatatcaagaagatatgtaaatttgtcttcaagcaatgcccactg
gtgtgcggtaaacgcgtaaaaagacatcaaattgaatcccacgtacaaaatgaatgtcaa
ctccgttccgttaaatgtgagcactgcaggaaagaagtgaaatatcttctcatgaaaaat
cacactcctgtttgtcctcgattcccagttagttgtgtatttcaatgtggacaaactctg
cccagagaagaaatgaaggttcatgtagacaaacaaggaacatgcccaactgccctttta
aagtgtgactgtagagaagtgggatgtgaatttaaaggaacacggtcggagctcgaagag
cactatagagcaaatgtacataaacatctaatgcttgcaatggtcgaagtgagaaaggag
aaagaaagggtcagaaatcttgaatctaattttacctcaagtcagtcttcactagcaacc
acgaaagaagacaaggagaagatcagatctcttgaattacagctagagacagttcgacgt
tcactaacaactaccagacaagaattaatggagatgaagcagtttgtttatgtgtggaaa
atagactctttgtctagacagtccaagcaatcacagataaacagtagctcattttacaca
ggaaaaccaggatacaaattgcatcttcgattctatcctaacaaaggtcagtcacatgct
ggactctacttgaatatcgaccgtggagattacgatagtctgctgcagtggcctttctct
cattgttttactatgtcagtgcttgaacagaaagtcaatggaaaacacataagctacaga
gttgctgcacctggagggtctctagccacaccaggaacattctgtggttctcgcaagttt
atctcaaaggaggtactgtcacaagaatgttacactaagaatgatacactgttcattaaa
cttgtggttgatatgaatgattaa
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