Coregonus clupeaformis (lake whitefish): 121530677
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Entry
121530677 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 10B isoform X1
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04115
p53 signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121530677
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121530677
04217 Necroptosis
121530677
04115 p53 signaling pathway
121530677
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121530677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121530677
04090 CD molecules [BR:
cclu04090
]
121530677
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121530677
CD molecules [BR:
cclu04090
]
Proteins
121530677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
MLANA
SPAR
DUF2514
Miga
DUF7198
hEGF
Motif
Other DBs
NCBI-GeneID:
121530677
NCBI-ProteinID:
XP_041691757
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Position
18:complement(29454431..29465336)
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AA seq
438 aa
AA seq
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MVVLSTGMCTTPLSMSYIHLMVVLIIWALNPMAAAQSGLELAQTGGSVRNRRQRDISCRE
NLEYPHDNICCLNCPAGKYVKVSCTGALEKGTCEDCDFDTYTEHDNGLQQCLKCTKCRSD
QVTTKTCTITQNTECQCKPGYFCAPDQACEVCKKCSRCKDNEVRVKNCTTTSNTVCKTRM
PTSSTISGKTPGPAAVIVIVVVVLSITAAIAGVYWKRRKHSKRTDSQNNPSETLEVVVDD
QNNRSIEERQNNQNAVLDGTQLHPLLEQTQAVGAKASSATEDEDNGLGDSLPNTTNSSQA
SLSALPSTPLPRSSPLPSPAAKRQPGTVAREDVLIKLSPLNGDESLKKSFELFEELDVNY
HNRFFRHIGLSDNAIKSTAHLHSEDRVYELLKVWLEKVGMEADINDLIKALLYFDQRLSA
ENIISKAIENSYYEYAEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggttctctcaactgggatgtgtacgacacctttgagtatgagctatatacatttg
atggttgtcctcataatctgggccctcaaccccatggcggcagctcaatctggccttgag
ttggcacagacaggaggcagcgtcaggaacaggagacagcgggacatctcatgccgggaa
aacctggagtacccacatgacaacatctgctgtttgaactgcccagctggtaaatatgtc
aaagtgtcgtgcacgggtgccttggagaaaggaacatgtgaggactgtgacttcgacaca
tacactgaacatgacaacggactgcaacagtgcttaaagtgcactaagtgtcgctcagat
caggtgaccacaaagacatgcaccatcactcagaacacagagtgccagtgtaaaccaggg
tatttctgtgcccctgaccaagcctgcgaggtgtgcaaaaagtgctcaagatgtaaagac
aatgaggtgagggtgaagaactgcaccactacgtccaacacggtctgtaagaccagaatg
cccacatccagcaccatctcaggtaaaactccaggcccagcagctgttattgtgattgtg
gtggtagtacttagtatcactgctgcaattgccggtgtctattggaagaggcgaaagcac
tctaaaaggacagactcccagaataatcccagtgagacgttggaggttgtggtggatgat
caaaacaacaggtcaattgaggagagacagaacaaccagaatgctgtgctggatggcaca
cagctacaccccttgctggagcagacccaggcggtgggtgccaaagcctcctcagccact
gaggatgaggacaatggactgggcgacagcctccccaacaccaccaactcctcccaggcc
agtctgtctgcactaccctcaacccccctccccagatcctccccgcttcccagccctgcg
gccaagaggcagcccggcactgtggctagggaagatgtcctcataaaactgtctcctttg
aatggtgacgagtccttgaagaaaagttttgaactttttgaagagctggacgttaactac
cataacagattcttcaggcacattggactcagtgacaacgctataaaaagcactgcacac
cttcattctgaagatcgagtctatgaactgttgaaagtatggttggaaaaggtgggcatg
gaagctgacattaatgacctaatcaaagcattactttattttgaccaaaggttatcagca
gaaaatattatttctaaagccattgaaaatagttattatgaatatgcagaaaagtaa
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