Coregonus clupeaformis (lake whitefish): 121530692
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Entry
121530692 CDS
T08357
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121530692
09133 Signaling molecules and interaction
04081 Hormone signaling
121530692
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
121530692
NCBI-ProteinID:
XP_045065138
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Position
29:40920526..40932746
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AA seq
467 aa
AA seq
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MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEMCEYPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNMTHNEPHMPLNATFPESFQQH
SGGSGTSFPISPNSPYPPSPASSGGVGTYPNSPASSGPSSPFQLPADTPPPAYMPPDEQM
GQEGSMETNSSSGPRNMPSGDVQPVEYEEPSHWCSIVYYELNNRVGEAYHASSTSVLVDG
FTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIFVQSR
NCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatgtccagcctgttctccttcaccagcccagctgtgaagcgtctgctgggg
tggaagcagggggacgaggaggagaaatgggctgagaaggctgttgacgccctggtcaag
aaactgaagaagaagaagggagccatggaggacctggagaaagccctcagcagcccagga
cagcccagtaagtgtgtgaccattcctcggtctctggacggtcgtctccaggtgtcccac
aggaagggtctcccccacgttatctactgcagggtgtggcgctggcccgacctgcagtct
caccatgagctcaagcctctggagatgtgtgaataccccttcggctccaaacagaaggag
gtctgcattaacccctaccactacaagagggtagagagcccagttctccctccggtgttg
gtgcctcgccacagtgagttcaacccacaacacagcctcctggtccagtttaggaacatg
actcacaacgagccccacatgcccctgaacgccaccttcccagagtccttccagcagcac
agtgggggcagcggtacctccttccccatctcccccaactccccctaccccccctcccca
gcctccagcggaggggtgggcacctaccccaactctcctgccagctccggaccctccagc
cccttccagcttccagctgacaccccacccccggcctacatgccccctgacgagcagatg
ggacaggaggggtccatggagaccaacagcagcagcgggcccaggaacatgcctagtggg
gatgtgcagccagtggagtatgaggaacctagccactggtgcagtattgtgtactatgag
ttgaacaacagagtgggtgaggcctaccatgcctcttctaccagcgtcctggtggacggc
ttcaccgacccctccaacaacaagaaccgcttctgcctggggttgctgtccaacgtcaac
cgcaactcaaccatagagaacacacgccgccacatcggcaaaggggtccacctgtactat
gtaggaggtgaggtctatgcagagtgtctgagcgacaccagtatcttcgttcagagtcgt
aactgtaactaccaccacggtttccaccccaccacggtgtgtaagatccctagtggctgc
agtctgaagatctttaacaaccaggaatttgctcagctactggcccagtctgttaaccac
ggctttgaggctgtctacgaactcaccaagatgtgcaccatccgcatgagctttgtaaag
ggctggggagctgagtatcaccgacaagatgtcaccagcaccccctgttggatagaagtg
caccttcacggccctctgcagtggctggataaagtgctgacacaaatgggctctcctctc
aaccccatctcctcagtgtcctaa
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