Coregonus clupeaformis (lake whitefish): 121530716
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Entry
121530716 CDS
T08357
Name
(RefSeq) tight junction protein ZO-2 isoform X1
KO
K06098
tight junction protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121530716
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
121530716
NCBI-ProteinID:
XP_041691829
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Position
18:33793892..33948885
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AA seq
1159 aa
AA seq
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MRLGITSMISDILSTSGNICLCWADGKSSGMEETVWEQYTVNLQRDSKMGFGIAVSGGRD
NPNVENGEMSIIVSDVLQGGPADGLLFEKDRVIQVNSILMDNVPHSFAVQQLRKCGKTAK
VTVKRPRKVALHSLKHPPSPGGESRDFGTTRYYDADDNQSDGGWQRGNGGPGYTHEPRDL
TPDNKNYLDPDYGGRGNRGRSRGRSQERASPSPEHRRDNSKGRALDREPPSPERLRIPQE
GSRGRSTDRERGGGGGGSPGGRSYGRGDSYERGGGRYGDVGGTGGRMVKSTSRDQLQEPP
SSTSPDLPRGGGGGGGGGGGLRDLEPLEKPVNVLLVKNRPNEEYGLRLGSQIFIKEMTST
GLATKDGNLQEGDIILKINGTVTENMSLNDAGKLIEKSRGKLQLVVQRDRRQILIRIPPL
VDSDSEPDDISEIESYHSYSPQEDRRSRQSDLSSHSSNERDNPRPLTSLEDSPRVAKMSA
MASPFRVPPPQDPPAPGPANLDSEGPPRLHEPPASAKTTPKILLRPSPEDEELYGANTVM
VSFQKGDSVGLRLAGGNDVGIFIAGIQDGSPAEEEGLRTGDQIMKVNKVEYRGMVREEAV
LYLLEIPKGEDVTILAQRKPDVYSDILVSGRGDSFFIRTHFDYEREAPQSLAFSRGEIFK
VVDTLYDGKLGNWLAIRTGKDKQLLEKGIIPNKSRADQMASVQDSHKAAGTDRADFWRLR
GQRAAKRKEPRKSREDVSATPVATRFPAYERVVLREAGFRRPVVLFGPIADAANDKLANE
LPELFVIAKTEPKDAGSEKSSGVVRLNTIRQIIEQDKHALLDVTPKAVDTLNYTQWYPIV
IFFNPDSKPGIKSMRQRVIPGSNRSARKLYEQAVKLRKTCSHLFTATIEVNSANDAWYGS
VKDSIREQQTQAVWVSEGKLDGTGTDLDLHDDRMSCLSAMSADYLSMDSRLASDYDDTAD
EGGAYTDNELDNEPTDQLPVSAISRSSEPVLAEEILRRCSAEIRGGVRRVGSREMLSSAS
PAHVFVPDPPKVKLVFREEIVPPWGVIGAYDPPPAEATTPTPPALPAATPLLSLAPSTPS
ARPSPWHCSPPSPSNPPIIPRTPPAAQPQSRWPLRARRSQRTPASSHSWGRSRPLRRWTT
LHVLRGCWSCRRHRTPGWR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgggaatcacctccatgatttcggatatactcagcacctccggtaacatctgc
ctctgctgggcggacggcaagagctcaggaatggaggagactgtttgggagcagtacact
gtgaacctacagagggactccaagatggggtttggtattgccgtgtcggggggtcgggac
aaccccaacgtggagaacggagagatgtcaatcatcgtgtcagacgtcctacagggagga
ccagctgacggactcctgtttgagaaagatcgtgtgatccaggtcaactccatcctcatg
gacaacgtgcctcattccttcgctgtgcagcagctacgcaaatgtgggaagaccgccaag
gtgacggtgaagagacctcggaaggtggctctccactccctgaagcaccccccctctccc
ggcggtgagagtcgagacttcggcaccacccgttactacgacgccgatgacaaccagagc
gacgggggctggcagcgcggcaacggtgggcccggttacacccacgagcctcgtgacctc
acccccgacaacaagaactacctggaccccgactacggtggccgtggtaatcgggggagg
agccgggggaggagccaggagagggcatcgccgagccctgagcatcgccgcgacaacagc
aaggggcgggccttggaccgggagccgcccagtcccgagaggctgcggattccacaggaa
ggcagccgggggaggagcacggaccgggagagaggaggagggggaggagggagtccaggt
gggaggagctacggccgaggtgacagctacgagcggggaggggggaggtacggggatgta
ggaggtaccggagggaggatggtgaagagtacgagtagagaccaactccaggagccgccc
tcctcgacctccccggacctcccacgaggaggaggaggaggaggaggaggaggaggggga
ctaagagacctggagcccctggagaaacctgttaatgtcctgctggtcaagaacagaccc
aacgaagagtacggtctgcgtctgggcagtcagatcttcatcaaggagatgaccagtaca
ggactggctaccaaggacggaaacttacaggagggagacatcattctaaagatcaacggg
acagtaacagagaacatgtctctgaacgatgcagggaagctcattgagaagtctagaggg
aaactccagctggtcgtccagagagaccgcagacagatcctcatccgtatcccgcccctc
gtcgactctgactccgaacctgacgatatctcagagatagagtcctaccattcctactct
ccccaggaggacaggagatctcgccagtctgacctctcctcccactcctccaatgagaga
gacaaccccagacctctaaccagcctggaagactctcccagggtagccaagatgtctgcc
atggcctcacctttcagggttccccccccacaggacccccccgccccgggccctgccaac
ctggactcagaggggccgccacgcctccacgagccaccagcgtcagcaaagaccactcct
aagatcctgctacgccccagcccagaggatgaagagctctatggggctaacactgtgatg
gtgagtttccagaagggggacagtgtgggtctgaggctggcggggggcaacgatgtgggc
atcttcatcgctggcatccaggacggcagtcctgccgaggaggaggggctacgcaccgga
gaccagatcatgaaggtgaataaggtagaataccgaggcatggtgagagaggaggctgtt
ctctatctgctggagattcctaaaggagaggacgtcaccatactggcccagaggaaacct
gatgtctacagtgacatcctggtgtctggtcgtggggactccttctttatcaggactcat
tttgattacgagcgtgaggctccccagagcctggccttctccagaggggagatcttcaag
gtggtggacaccctctacgacggcaagctgggaaactggctggccatccgcaccggcaag
gacaaacagctgctggagaagggcatcatccccaacaagagcagggctgaccagatggcg
agcgtccaggactcccataaggccgctgggacggaccgggctgacttctggcgtctgagg
ggtcaaagggcagccaagagaaaggagccgaggaagagcagagaggatgtcagcgctacg
cccgtcgccacacgcttccccgcgtacgagagagtcgtgctcagagaggctggttttaga
cgtcctgtggttctgtttggacctatagctgatgcagccaacgacaagcttgctaacgag
ctgcctgaactattcgtcatcgccaaaacagagcctaaagatgcagggtcagagaaatcc
tcaggagtggtgagactcaacaccatccgccagatcatcgagcaggacaagcatgccctg
ctggatgtgactcccaaggcggtagacacactgaactacacccagtggtaccccatcgtc
atcttcttcaacccagacagtaaaccaggcattaagtccatgaggcagagggtgatacct
ggatccaaccgctcagcacgcaaactatacgaacaagctgtcaaactgaggaagacctgc
tctcacctcttcactgctactattgaggtgaactcggccaacgatgcgtggtacggcagt
gtcaaggactctatcagagagcagcagactcaggctgtctgggtgtctgaggggaagctg
gatgggacggggacggaccttgatctccacgacgaccgcatgtcctgcctgtcagccatg
tcggccgactacctgagcatggacagccgactggccagcgactatgatgacacggcggac
gagggcggggcttatacggataacgagctggacaatgaaccgaccgaccaactaccggtg
tcggctataagccgctcctctgagcccgtgctggcagaggagatcctgcgcaggtgcagt
gcagagatccgtggtggcgtcaggagggtgggcagcagggagatgctcagcagtgccagc
ccagcacacgtgtttgtacctgacccccccaaggtgaagttggtgttcagggaagagata
gtccctccctggggggtgataggggcgtacgacccccccccagccgaggctacgactccc
actcctccagccctgccagcagcgacccccctcctctccctcgcaccctcaactccttcg
gcaaggccaagcccctggcactgcagccccccatcgccctcaaaccctcctataataccc
aggacaccgccagcagcacagccccagtcacggtggcccctacgggcccggaggagccag
aggaccccagcctcaagtcattcctggggaaggtcaaggcctttgagaagatggaccact
ttgcacgtgctcagaggatgctggagctgcaggaggcacagaacgccaggttggagatag
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