Coregonus clupeaformis (lake whitefish): 121532048
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Entry
121532048 CDS
T08357
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04510
Focal adhesion
cclu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121532048
04020 Calcium signaling pathway
121532048
09133 Signaling molecules and interaction
04518 Integrin signaling
121532048
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121532048
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121532048
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121532048
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121532048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
I-set
VEGFR1-3_N_Ig-like
Pkinase
Ig_2
ig
VEGFR-2_TMD
V-set
VEGFR-1-like_Ig-like
Ig_PDGFR_d4
Ig_MYOM1
Haspin_kinase
ICAM_N
Motif
Other DBs
NCBI-GeneID:
121532048
NCBI-ProteinID:
XP_041693632
LinkDB
All DBs
Position
2
Genome browser
AA seq
1307 aa
AA seq
DB search
MAPLNCAKLSVLFHLITSISGQVILPAPLLLPSGDTHLLHTGKSLNLTCRGAAQLHWRLP
WRDVTSEGVRVEECEPQVNGHCSKLLVRNLSPNDTGFYSCRYAQPSADISSTYVYVKDKK
HQFVENHFRNPYTLFTYRHEATLVIPCRTTSPDQIVTLEAQPPLSEKIEQGKEWDPKMGF
KIPYGPYEFYSLLTCVTSVNGQRVQSHYIPLRKTIYLRNVKINPERIKLLVGDSLVLNCS
AETTFNGRINLTWEYPKRMVNRNPTVNKTRENPASVTRMYKAITLSNITMDDRGTYRCTA
EIGNSEMGNKKHASAKVTIYEHPYLNVSYKNERARRVVYTEGRSKLMFEPKVNALPPPNT
MTWYKDGVPINENSTCYESSGYNLLVKDVKQKDAGVFTIALGNKERGLYRNLSYTLVVRV
RPMISEEEVASVDLQPYMFGKQHQLTCTAFGVPMPVITWLWQPCHPDPTDKECTLYTEPI
PVQMDDKGNYSHNWIESIDNKTELVKGKNKTVSTLVVGAANVSGIYSCAAQNELGTRTLR
TLFYVDDHPQHLSIEPQTAIEGDDVTLTCRGTRYLYTDLQWYNPQNYTVTTANVTALQLS
PYSISRSLSLHNVSRSHTAGYQCWARNLHSKTVIVQTVLTVDERKRPWLRQNLTNQDVNS
SSTLTMACYALGVPPPYITWYKDNLPVQEGPGITLGDDGVLTIERVKKDDEGLYECLASN
NEGSVKASAVVTVVGDEGKANIEVIVLVCTGAAATFLWLMLILFIRKLRKPADYKMGPSI
IIDPDECPLDEQCERLQYDGSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKT
VAVKMLKGGATTNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGNL
SNYLRSKRADFIVYKSQDGKVVTSGSGCDLSELIKRRLESVASTGSSASSGFVEDKSYCD
SEEEEEEPEDLYKRVLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKVYTTQSDVWSFGVLMWEIFSLGAS
PYPGLHIDEDFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQAEPGDRPTFTELVERLGDLL
QASVQQEGKHYIPIAALLSKEGDPSNTALSEETNTRPLSYRDSGSTWNIKIRPASVKTFD
EVTMENGSNDNHERGQSDSGMGLSSDDMNTLKRLESLARPLSIMALAMKAVSMSKESVLT
EGEKDKYPQPVPSLDFTLDDSSLEPGLECHSPPPDYNYVVRYSTPPV
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggccccgctcaactgcgcgaaactctcagtactctttcatttgatcacgtctataagc
ggtcaggtcatcctgcctgcccctctgctgctgccctctggggacacacaccttctccac
actggcaagtcactcaacctcacctgcagaggtgcggcccagctgcactggaggctgccc
tggcgggacgtcacctcggagggggtgcgtgtggaggagtgtgagccccaggtgaacggc
cactgcagtaagctactggtgagaaacctgagccccaacgacacggggttctacagctgc
aggtacgcccagccctccgccgacatcagctctacctacgtatacgtcaaagataaaaaa
catcagtttgtggagaaccatttccgcaatccatacaccctgtttacctacagacatgag
gccaccctagtgattccctgtagaacaacttctcctgaccagatcgtcactcttgaagca
cagccacccttatcagagaagattgaacaagggaaggaatgggaccccaaaatgggcttc
aagatcccatatggtccctacgaattctatagtctcctgacctgtgtcaccagcgtcaac
ggccaacgggtccagtcccactacatccctctgaggaaaactatctacctgaggaacgta
aagatcaacccagaacgtatcaagctgttagtgggagatagcctggtcctcaactgctcc
gcagagaccaccttcaatggaaggatcaacttgacttgggaatacccaaagaggatggtc
aatcggaaccccaccgtcaacaagaccagagagaatccggcttcggtcaccaggatgtac
aaagccatcaccttgtccaacatcaccatggacgacaggggcacgtacaggtgcacggct
gagatagggaactctgagatggggaacaagaagcatgcctcagcgaaggtcaccatctat
gaacatccatacctgaatgtgtcctataagaatgaacgggccaggagagtggtctacaca
gaaggtagaagcaagctgatgtttgaacccaaggtcaatgcactgccaccacccaacact
atgacatggtataaggatggcgtccctatcaacgagaactccacctgttacgagtcttca
ggctacaacctcctcgtcaaggacgtgaagcagaaggatgccggggtcttcaccatcgcc
ctgggcaacaaggagagaggcctctacaggaatctcagctacactctggtagtccgagtg
aggcctatgatctcagaagaggaggtggcctcggtggacctgcagccctacatgttcggc
aagcagcaccagctaacctgcaccgcctttggagtgcccatgcccgtcatcacgtggctc
tggcaaccatgccatcctgaccccaccgacaaagagtgtaccctttacactgagccaatc
ccagttcaaatggacgataaggggaactactcacacaactggattgagagcatagacaac
aaaactgaactggtgaaaggaaagaacaagactgtgagtacgctagtggtgggggcagct
aacgtctcggggatctactcctgcgcggcccagaacgaacttggcacccgcacactgaga
acccttttctatgtggatgatcaccctcagcacctgtccatcgagccccagactgccatc
gagggtgatgacgtcactctgacttgccgcggcactcggtacctgtacacagacctgcag
tggtacaaccctcaaaactacaccgtcaccaccgccaacgtcacggccctgcagctcagc
ccctactctatctctcgctccctctccctgcacaacgtatccaggagtcacacagcaggc
taccagtgctgggcgcgtaacctccacagcaagacagtcatagtccagactgtgctgact
gtggatgagaggaagaggccgtggctgagacagaacctgaccaatcaggatgtaaacagc
agcagtactctgactatggcctgctacgccctgggagtgccgccaccctacatcacctgg
tacaaagacaacctaccagtacaagagggtccaggtattactctgggggacgatggggtg
ctgacgatcgagagagtgaagaaagatgatgagggcttgtacgagtgtctggccagcaac
aatgaggggagtgtgaaagccagcgctgtcgtcactgtcgtgggtgatgaggggaaggcc
aacattgaggtgatcgtcctggtgtgtacaggagctgctgccaccttcctctggctcatg
ctcatcctcttcatccgcaagctgaggaagcctgcagactacaagatgggtccatccatc
atcatcgacccagacgagtgtcctctggacgagcagtgtgaacgcctgcagtatgacggc
agcaagtgggagtttccccgagaccgcctcagactgggcaaaactctgggccatggagcc
ttcgggaaagtggtagaggcctctgcttttgggattgacaagctctcgacctgcaagact
gtggccgtcaaaatgctgaaaggaggagctacgacaaatgagcgcaaggctctgatgtcg
gagctgaagatcctgatccacattggtcatcatctgaacgtggtcaacctgctgggagcc
tgcaccaagcctggaggtccattgatgatgatagtggagtactgcaaatatggaaacttg
tcaaactacttgagaagcaagagggctgatttcatcgtttataagagccaggacggtaag
gtggtgacgtcggggtcaggctgtgacctgagcgagctcatcaagcggcgcctggagagc
gtggccagcaccggaagctcggccagctccggcttcgtggaagataagagctactgcgac
tcagaggaagaggaggaagagccagaggatctgtacaagagagtgctgacaatggaagat
ttgatttgctacagtttccaagttgcaaaaggcatggagttcctggcttcacgcaagtgt
attcatcgtgatctggctgcaagaaacatcctactttctgagaataatgttgtgaagata
tgcgattttggactggccagagacatctacaaagacccagactacgttcgcaaaggagat
gccagactgcccctcaagtggatggcgccagaggccatttttgacaaggtctacaccact
cagagcgatgtgtggtcctttggagtcctgatgtgggagatcttctctctgggtgcctct
ccatatcccggcttacacatcgacgaggacttctgctgccgactgaaggaagggaccagg
atgagagctccagaatactcctcctctgaaatataccagaccatgttggactgctggcag
gccgagccaggagacaggccaaccttcactgagctggtggagagactaggagacctgcta
caggccagcgtacagcaggagggcaagcattacatccctatagcagccctgctgtccaag
gagggtgacccctccaacacggccctgtcagaagagaccaacaccaggccactctcttac
cgcgactcagggagcacctggaacattaagatccgtccagcaagtgtgaagacctttgat
gaggttaccatggagaacggctctaacgacaaccatgagaggggccagtcggacagtgga
atgggcctgtcgtctgatgatatgaacacgctgaagcgcctggagtccttggcccgacct
ctcagcatcatggccctggcgatgaaggcggtgagtatgagtaaggagtcggtgctgact
gaaggagagaaggacaagtaccctcagcctgtcccctctctggacttcaccctggacgac
tcgtccctggagcccggtctggagtgccacagcccgccccctgactacaactatgtggtg
cgctactccaccccacctgtgtag
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