Coregonus clupeaformis (lake whitefish): 121532654
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Entry
121532654 CDS
T08357
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04370
VEGF signaling pathway
cclu04371
Apelin signaling pathway
Module
cclu_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121532654
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121532654
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
121532654
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
SAICAR_synt
Motif
Other DBs
NCBI-GeneID:
121532654
NCBI-ProteinID:
XP_041694375
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MDPKITEPDPPSSRNGITQVLQYGEFTVTGNRKVRYTVSLTERDLTIQKITSTPAGRSKV
VFNLRDCVGCRAFRTDDNTDAGAYFSAYFYPFKRRWMSSGVARQRVEQCFRVALFQDQRA
NLEEAEKWAGTIRESSARQQHLRNGVLYSEVHLPCSVMLLVNPHSGKGQALSLFTGHVQR
MLNEAGVPHTLVITERQNHARELVREADLSQWEAIVIMSGDGLLFEVVNGLMEREDWEEA
IQTPLGILPGGSGNALAASIHHYSGAQPVSSEELLVSCGFLLCKGLVSRMDLASVHLGSS
PSSPTRLFSFLSLAWGFVADVDVESEKYRHVGAARFTMGTLVRLASLRVYKGRLAYLPVD
KAKKREPMSANATLTGPPDSLLVPLDQPVPSDWVVVPEEDFVLMLAMYQSHLAEDLYAAP
DSTLDDGLIHLIYVRAGISRTALLRLFLAMEKGTHLANNCPHLVYARVRALRLEPYSPKG
VITVDGEVVEYGPVQAQVHGGMARLITR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaagataaccgaaccggaccctccatcctctcgcaacgggatcacccaggtt
ctgcagtacggggaattcacggtcaccggcaaccgaaaggtgaggtacaccgtgagttta
accgagagggacctcaccattcagaagatcacgtcgacacctgcgggacggagcaaggtg
gttttcaacttgagggactgtgtcggctgccgggctttcaggacagatgacaatacggac
gcgggagcgtacttctctgcctatttctacccgtttaaaagacgatggatgagctctggt
gtggccaggcagcgggtcgagcagtgctttcgggtagccctgttccaagaccagcgcgcc
aacctggaggaggcagagaaatgggctggcaccatccgcgagagctctgctcgtcagcaa
catttgagaaatggtgtgctgtacagtgaggtgcaccttccctgcagtgtcatgctactg
gtgaaccctcacagtgggaagggccaggccctcagcctcttcaccggacacgtccaacgt
atgctcaacgaggccggggtcccacacacactggtcatcacagagcggcagaaccatgcc
agagagttggtgagagaggctgacctgtcacagtgggaagctatagtcatcatgtccggg
gacggacttctgtttgaggtggtgaatggcctgatggagagagaggactgggaggaggcc
atccagaccccactgggcatcctaccggggggctccggtaacgccctggctgcctctata
caccactactctggggcccagccggtgtcaagcgaggagctgctcgtcagctgtggcttc
ctgctgtgtaagggcctggtgtctcgcatggacctggcatccgtccacctgggctccagc
ccctccagccctacgcgcctcttctccttcctctcgctggcctggggcttcgtggctgac
gtggacgtggagagcgagaagtaccgccacgtgggcgccgcccgcttcaccatggggacg
ttggtcaggctggcatcgttgagggtgtataagggccgtctagcatacctgccggttgac
aaggcgaagaagagggaacccatgtccgctaatgccacgctaacgggcccgccagactct
ctcctggtgcccctggaccagccggtgcccagcgactgggtggtggtgcccgaggaggac
tttgtcctcatgctggccatgtaccagtctcacctggcagaggacctgtatgccgcgccc
gactctacactcgatgacggactcatccacctgatatacgtccgagcaggcatatcgcgc
acggccctgctccggctcttcctggccatggagaagggcacccacctagccaacaactgc
ccccacctggtgtacgcccgtgtgcgggcgctgcggctggagccctactcgcccaaaggg
gtgatcacggtggatggggaggtggtggagtatgggccggtccaggcccaggtacacggc
gggatggccaggctcatcactagatga
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