KEGG   Coregonus clupeaformis (lake whitefish): 121533600
Entry
121533600         CDS       T08357                                 
Symbol
tpm4a
Name
(RefSeq) tropomyosin 4a isoform X1
  KO
K10375  tropomyosin 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260  Cardiac muscle contraction
cclu04261  Adrenergic signaling in cardiomyocytes
cclu04814  Motor proteins
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121533600 (tpm4a)
   04820 Cytoskeleton in muscle cells
    121533600 (tpm4a)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    121533600 (tpm4a)
   04261 Adrenergic signaling in cardiomyocytes
    121533600 (tpm4a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121533600 (tpm4a)
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     121533600 (tpm4a)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ PUMA_CC ATG16 Crescentin CENP-F_leu_zip TMF_DNA_bd DUF745 ERM_helical DUF3450 Laminin_I Nuf2_DHR10-like DUF1664 Lebercilin Exonuc_VII_L FPP MscS_porin NPV_P10 SlyX Fez1
Other DBs
NCBI-GeneID: 121533600
NCBI-ProteinID: XP_041695619
LinkDB
Position
20:complement(49739775..49769012)
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDELLSLQKNLKGTEDELDKY
SEALKDAQEKLEQSEKTAADAEGDVAGLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccatcgac
cgcgcagagcaggccgagaccgataagaaggcagcggaggacaagtgcaagcagctggaa
gacgagctgctgagcctgcagaagaatctgaaggggactgaagatgagttggacaaatac
tctgaggccctcaaagacgcccaggagaaactggaacagtctgagaagaccgccgcagac
gcggagggtgatgtggcgggtctgaaccgcaggatccagctagtggaggaggagttggac
cgggcccaggagaggctggccaccgcgctgcagaaactggaggaggcagagaaggctgca
gatgagagcgagagaggtatgaaggtgatagagaacagggcctctaaggatgaggagaag
atggagatccaggagatgcagctgaaggaggccaagcacatcgctgaggaggccgaccga
aaatacgaggaggtggcccgtaagctggtgatcttggagggagagctggagagagctgag
gagagggcagaagtctcagaacttaaatgcagtgatctggaggaggagttgaaaaatgtg
accaacaacctcaagtccctagaagcctcgtctgagaagtactcagaaaaagaggacaag
tatgaggaggagatcaaggttcttagtgacaagctgaaggaggctgagactcgtgcagaa
tttgcagagaggactgtggccaaactggaaaagtccatcgacgacctggaagatgaactg
tacgctcagaagctgaagtacaaggctatcagcgaggagctggaccatgccctcaatgac
atgacctccttgtag

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