Coregonus clupeaformis (lake whitefish): 121533600
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Entry
121533600 CDS
T08357
Symbol
tpm4a
Name
(RefSeq) tropomyosin 4a isoform X1
KO
K10375
tropomyosin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121533600 (tpm4a)
04820 Cytoskeleton in muscle cells
121533600 (tpm4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121533600 (tpm4a)
04261 Adrenergic signaling in cardiomyocytes
121533600 (tpm4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121533600 (tpm4a)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121533600 (tpm4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
ATG16
Crescentin
CENP-F_leu_zip
TMF_DNA_bd
DUF745
ERM_helical
DUF3450
Laminin_I
Nuf2_DHR10-like
DUF1664
Lebercilin
Exonuc_VII_L
FPP
MscS_porin
NPV_P10
SlyX
Fez1
Motif
Other DBs
NCBI-GeneID:
121533600
NCBI-ProteinID:
XP_041695619
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Position
20:complement(49739775..49769012)
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AA seq
284 aa
AA seq
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MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDELLSLQKNLKGTEDELDKY
SEALKDAQEKLEQSEKTAADAEGDVAGLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccatcgac
cgcgcagagcaggccgagaccgataagaaggcagcggaggacaagtgcaagcagctggaa
gacgagctgctgagcctgcagaagaatctgaaggggactgaagatgagttggacaaatac
tctgaggccctcaaagacgcccaggagaaactggaacagtctgagaagaccgccgcagac
gcggagggtgatgtggcgggtctgaaccgcaggatccagctagtggaggaggagttggac
cgggcccaggagaggctggccaccgcgctgcagaaactggaggaggcagagaaggctgca
gatgagagcgagagaggtatgaaggtgatagagaacagggcctctaaggatgaggagaag
atggagatccaggagatgcagctgaaggaggccaagcacatcgctgaggaggccgaccga
aaatacgaggaggtggcccgtaagctggtgatcttggagggagagctggagagagctgag
gagagggcagaagtctcagaacttaaatgcagtgatctggaggaggagttgaaaaatgtg
accaacaacctcaagtccctagaagcctcgtctgagaagtactcagaaaaagaggacaag
tatgaggaggagatcaaggttcttagtgacaagctgaaggaggctgagactcgtgcagaa
tttgcagagaggactgtggccaaactggaaaagtccatcgacgacctggaagatgaactg
tacgctcagaagctgaagtacaaggctatcagcgaggagctggaccatgccctcaatgac
atgacctccttgtag
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