Coregonus clupeaformis (lake whitefish): 121533755
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Entry
121533755 CDS
T08357
Name
(RefSeq) GTP-binding nuclear protein Ran
KO
K07936
GTP-binding nuclear protein Ran
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
cclu03013
Nucleocytoplasmic transport
cclu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121533755
03008 Ribosome biogenesis in eukaryotes
121533755
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121533755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121533755
03009 Ribosome biogenesis [BR:
cclu03009
]
121533755
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121533755
03036 Chromosome and associated proteins [BR:
cclu03036
]
121533755
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121533755
04031 GTP-binding proteins [BR:
cclu04031
]
121533755
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121533755
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121533755
Pre-60S particles
121533755
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121533755
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121533755
Spindle formation proteins
121533755
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121533755
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Ran Family
Ran
121533755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RNA_helicase
AAA_24
G-alpha
Gtr1_RagA
Pox_A32
ArgoMid
AAA_7
Septin
AAA_16
AAA_22
TsaE
DUF5906
SRPRB
AAA_33
Motif
Other DBs
NCBI-GeneID:
121533755
NCBI-ProteinID:
XP_041695899
UniProt:
W5S0K2
LinkDB
All DBs
Position
2:complement(17266952..17270859)
Genome browser
AA seq
215 aa
AA seq
DB search
MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEILMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggcgagccgcaggtccagttcaagcttgtgttggttggcgatggaggaacg
ggaaagaccactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgcc
acactgggagtggaggtgcacccgctggttttccacaccaacagaggggccatcaaatac
aatgtgtgggacacagccgggcaggagaagtttggagggctccgagatggctactacatc
caagcccagtgcgcgatcatcatgtttgacgtcacgtcccgagtcacctacaagaacgta
cccaactggcatcgtgatctggtgcgagtctgtgagaacattcccatagtcctctgcggc
aacaaggtggacatcaaagacaggaaagtcaaagccaagagcatcgtattccatcgcaag
aagaacctccagtactacgacatctctgccaagagtaattacaactttgagaagcccttc
ctgtggctagcacggaagctgattggagaccccaacctggagttcgtggccatgcccgct
ctcgccccccccgagattctcatggacccctccctcgctgcgcagtacgagcacgacctc
aaagttgcatcagaaacagcgctgccagatgaagatgatgacctttaa
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