KEGG   Coregonus clupeaformis (lake whitefish): 121533755
Entry
121533755         CDS       T08357                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008  Ribosome biogenesis in eukaryotes
cclu03013  Nucleocytoplasmic transport
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121533755
   03008 Ribosome biogenesis in eukaryotes
    121533755
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121533755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121533755
   03009 Ribosome biogenesis [BR:cclu03009]
    121533755
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121533755
   03036 Chromosome and associated proteins [BR:cclu03036]
    121533755
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121533755
   04031 GTP-binding proteins [BR:cclu04031]
    121533755
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     121533755
Ribosome biogenesis [BR:cclu03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    121533755
  Pre-60S particles
    121533755
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    121533755
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     121533755
   Spindle formation proteins
    121533755
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121533755
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    121533755
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RNA_helicase AAA_24 G-alpha Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin AAA_16 AAA_22 TsaE DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 121533755
NCBI-ProteinID: XP_041695899
UniProt: W5S0K2
LinkDB
Position
2:complement(17266952..17270859)
AA seq 215 aa
MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEILMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagaaggcgagccgcaggtccagttcaagcttgtgttggttggcgatggaggaacg
ggaaagaccactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgcc
acactgggagtggaggtgcacccgctggttttccacaccaacagaggggccatcaaatac
aatgtgtgggacacagccgggcaggagaagtttggagggctccgagatggctactacatc
caagcccagtgcgcgatcatcatgtttgacgtcacgtcccgagtcacctacaagaacgta
cccaactggcatcgtgatctggtgcgagtctgtgagaacattcccatagtcctctgcggc
aacaaggtggacatcaaagacaggaaagtcaaagccaagagcatcgtattccatcgcaag
aagaacctccagtactacgacatctctgccaagagtaattacaactttgagaagcccttc
ctgtggctagcacggaagctgattggagaccccaacctggagttcgtggccatgcccgct
ctcgccccccccgagattctcatggacccctccctcgctgcgcagtacgagcacgacctc
aaagttgcatcagaaacagcgctgccagatgaagatgatgacctttaa

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