Coregonus clupeaformis (lake whitefish): 121533909
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Entry
121533909 CDS
T08357
Name
(RefSeq) pre-B-cell leukemia transcription factor 1-like isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121533909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121533909
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121533909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
Motif
Other DBs
NCBI-GeneID:
121533909
NCBI-ProteinID:
XP_041696181
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All DBs
Position
20:complement(34654901..34758390)
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AA seq
450 aa
AA seq
DB search
MDQQPRLMHSHAGVGMASHPGLSQHMEGTGGTEGDGRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPEK
GGGSAAAAAAAAASGGGAGADTSAEHSDYRAKLSQIRQIYHTELEKYEQMVSHGGWRGES
YTGSHGNGNKACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC
EAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV
SNWFGNKRIRYKKNIGKFQEEANMYAAKTAVNATNVSSHGSQANSPSTPNSAGSAGSFNM
SNSGDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSEGLTASQMYSQQSIN
ANGGWQDATTPSSVTSPTEGPGSVHSDTSN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagccgcggttgatgcactctcatgcgggagtagggatggcatcgcacccc
ggcctgtcgcaacacatggaaggcaccggaggaacggaaggcgatgggagaaaacaggac
attggagacattttacagcaaataatgaccatcacagatcagagtctggatgaagctcaa
gccaggaaacacgccttgaattgccacaggatgaagcctgctctcttcaacgtcttgtgt
gaaatcaaagaaaaaacagtgctgagtatccgtggcgcccaggaggaggagcctccagat
gcccagctcatgcgattggacaacatgttgctggcggagggcgtgtctggaccggagaag
ggaggcggttctgcagcggctgcggctgcagctgcagcctcaggaggcggggcaggagcg
gatacttcagcggaacactcggactacagagccaagctctctcagatcagacagatctac
cacacagagctggagaaatacgaacagatggtatcccatggcggatggaggggggagagt
tacacagggagtcatggcaacggaaacaaggcttgtaacgagttcactacccatgtgatg
aacctgctgagggagcagagtcgcacgcggcccatctctcccaaggagatagagcgcatg
gtgggcatcatccaccgcaagttcagctccatccagatgcagctcaaacagagcacctgc
gaagccgtcatgatcctgcgctcacgcttcctcgacgccagacggaaaagacggaacttc
aacaagcaggcgacagagatcctgaatgagtacttctactcccacctgtctaacccctac
cctagtgaagaggccaaggaagagctggccaagaagtgctccatcacagtttcacaggtt
tccaactggttcggaaacaaaagaatcagatacaagaaaaacattggaaagttccaggaa
gaagccaatatgtatgctgccaaaactgccgtcaacgcgaccaacgtatcctcacatgga
agccaggctaactcgccctccactccaaattctgcaggttctgctggctcttttaacatg
tcaaactccggcgacttgttcatgagcgtgcagtctctcaatggggactcgtaccaaggt
gctcaggttggagccaacgtgcagtcacaggtggatacccttcgccatgttatcagtcag
acaggcggatacagtgagggcctcacagccagccagatgtatagtcagcagagcatcaat
gcaaatggaggctggcaggatgctaccaccccctcatcagtgacatcacccacagaagga
cccggaagtgttcactctgacacgtccaactaa
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