Coregonus clupeaformis (lake whitefish): 121533956
Help
Entry
121533956 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121533956
KO
K01587
phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:
4.1.1.21
6.3.2.6
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00230
Purine metabolism
cclu01100
Metabolic pathways
Module
cclu_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
121533956
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.21 phosphoribosylaminoimidazole carboxylase
121533956
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase
121533956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAICAR_synt
Myb_DNA-bind_4
AIRC
MADF_DNA_bdg
Myb_DNA-bind_3
DAP3
Motif
Other DBs
NCBI-GeneID:
121533956
NCBI-ProteinID:
XP_045061766
LinkDB
All DBs
Position
20:58450280..58458294
Genome browser
AA seq
1014 aa
AA seq
DB search
MEKGAGRQRGGEEEEIVEVEETGAAGQWGEAEVLALLSVWGELGAAQHSGVCSRATFECI
SEQLKGLNVLHGWRECQAQCRRLGLLGRKAEQPGTSTNYRQGAAAMMDAQMNQSDWEEKE
DLTSEKEAHSSSVTIQEGGPCQILRGALPYAQYLGPEGGRHWTDEEVRALLCVWSDRHIR
QRLKGTLRNKAIFQEMARRMQRGFGVVRNWKQCRTKYKNLKYEYKTAKSAQAAAGSSGPG
RYIKFFDEVEAIVLDRGEDGDQDMQRGPEGDQGAGKLGHLEGQTQSKEPKGDLVIEIDHD
DNSDDYELDTDQNQRESGAHLSPLNQSSSEQFHVVTVSDTGRNWSDQEVRALIQVWSEEG
VCRQLESSTRKRDIFVQISRRLLQQGVERDWKQCHTKYKNLKYLYRSLQRGRADSTDPRR
LMRFYDEVDAILTRSDSGPAIGYEKQAEAGPILAGAMIRYEDDTDAMTHPVNSYTAQIYE
LIPRNEDKQTHTDNAETDKRQDLTAKRGLKRKALDQDTCRIVKRHDTGGSCAESIDFQCK
LEEDQYIPIIEINSVCSMAASVSARQKQVGLINSESKPCSWNGFRLSTNMAPASELKLGQ
KLNEGKTKQIFELADEPGHVLVQSKDQITAGNAVRKDQMEGKAAIANRTTSCVFKLLQEA
GIKTAFVRQQSETAFVAVHCEMIPIEWVCRRVATGSFLKRNPGVKEGYRFSPLKMEMFFK
DDANNDPQWSEEQLLETKFSLAGLTIGLCEVDIMNRSTVAIFEVLERAWATQNCTLVDMK
IEFGVNVSTKEIVLADVIDNDSWRLWPAGDRSQQKDKQVYRDLKEVTPEAMQMVKKNFEW
VSERVKLLLEPKASGRVVVLMGSTSDLAHCEKIRKACGSYGISCVLRVTSAHKGPDETLH
IKAEYEGDGVPTVFVAVAGRSNGLGPVMSGNTAYPVINCPPITPDWGAQDIWSSLRMPSG
LGCSTVLSPDAAAQFAAQIFGLSDHLVWSKLRASMLNTWVSLKQADKKLQACSL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggagctgggagacaaagaggaggtgaagaggaagagattgtagaggtagag
gagaccggtgcagcagggcagtggggggaagcggaggtgctggctcttctgtcagtgtgg
ggggagctgggagcagctcagcattcaggtgtatgcagcagagccacatttgaatgcata
tcagagcagctgaaagggttgaatgtgctgcatggctggagggagtgccaggcccagtgc
aggaggctgggactgctgggcaggaaggctgaacagccaggcacatccaccaactacagg
cagggggcagcagccatgatggacgcccaaatgaatcaaagtgattgggaggaaaaggag
gatctgaccagtgagaaagaggctcactcttcctcagtcacaatacaggaaggaggcccg
tgtcagattcttcgcggggctctcccatatgcccaatacttgggccctgaggggggccgc
cattggacagatgaggaggtgcgagctctgttgtgtgtctggtctgaccgccacatccgc
caacgcctcaaaggaacgctacgcaacaaggccatcttccaggagatggcccgccgcatg
cagagaggcttcggagtggtgcgcaactggaaacaatgccgcactaaatacaagaacctc
aagtatgagtacaagacagccaagagcgcacaggccgctgcagggagcagtggcccagga
aggtacattaagttctttgatgaggtagaggccatagtgctggacaggggagaggatggg
gaccaggatatgcagagaggacctgaaggggaccagggagctgggaagctgggacatctg
gaaggccagactcagtctaaagaacccaaaggagacctggtcattgagatagaccatgat
gacaatagtgacgattatgagctggacacagaccaaaaccaaagggaatcaggagcccat
ctatcaccattgaatcaatctagctccgagcaattccatgtggtaacggtgtccgacaca
ggacggaactggagtgaccaggaggtgcgtgctctgatccaggtgtggtctgaggagggc
gtgtgcaggcagctggagagctccaccaggaagagggacatctttgtgcagatctcccgc
cggctactgcagcagggggtggagcgcgactggaagcagtgtcacaccaaatacaagaac
ctcaagtacctgtatcgctccctacagaggggcagggctgacagcacagacccacgccgt
cttatgaggttctatgacgaggtggatgccattttgaccaggtcggatagtggacctgcc
ataggatatgagaaacaagcagaggctggccccattttggccggggccatgattaggtat
gaggatgacacagatgccatgactcatccagttaactcttacacagctcaaatctatgaa
cttatccccaggaatgaggacaaacaaacacacacagacaatgctgagaccgataaaaga
caggatctgactgcaaaaagagggctgaaaaggaaagcgttggatcaagatacctgtaga
attgtgaagagacatgatactgggggcagctgtgctgagagtattgacttccagtgcaaa
ttggaggaggaccaatacattcccattatagagatcaactcagtctgctcaatggcagcc
tctgtctcagcccgacaaaaacaggtaggcctaatcaactccgaatcaaagccatgctcg
tggaacggtttcagattatctaccaacatggcgcctgcatcagagctgaaacttggacag
aaactaaatgagggcaagaccaagcagatcttcgagctcgcggatgagccaggccatgtt
ctggtccagtcgaaggatcaaatcacagccgggaatgcggtgaggaaggaccagatggag
ggaaaggccgcgatagcaaacagaaccacgagctgtgttttcaagctgctgcaggaagcg
ggcatcaagacagcctttgtgaggcagcagtcggagacggcgttcgtggcggtccactgt
gagatgatccccatcgagtgggtctgtcgcagggtggccaccggatccttcctcaagagg
aaccctggcgtcaaggagggctacaggttctcccctctgaaaatggagatgttcttcaag
gatgacgccaacaatgaccctcagtggtcagaggagcagctgctggagactaagttctct
ctggctgggctcaccatcggcctctgtgaggtggacatcatgaaccgcagcactgtggcc
atctttgaggttctggagagggcctgggccacccagaactgcacgctggtggatatgaag
attgagtttggtgtgaatgtgagcaccaaagagattgtgcttgctgacgtgattgacaat
gattcctggaggctgtggccagcaggagatcggagtcagcagaaagacaaacaggtgtac
cgggacctgaaggaggtgactcctgaagccatgcagatggtgaagaagaactttgagtgg
gtctctgaaagagtgaagcttctgctggagcccaaggccagtggcagagtggtggttctg
atgggctccacctctgacctggcccactgtgagaagatcaggaaggcctgtggctcctac
ggaatttcctgtgtcctccgagtcacctctgcacacaaaggaccagacgagactcttcac
atcaaagctgaatacgaaggggatggagtaccgactgtgtttgtggctgtggcgggcaga
agcaacggccttggtccagtgatgtcaggaaacaccgcctacccagtcatcaattgccct
cctatcacccctgactggggggcacaggacatctggtcatcccttcgcatgccaagtggt
cttggctgctccacagtcctctcccctgatgctgcagcccagtttgcagctcagatcttt
gggctcagtgaccacctggtgtggtccaaactgcgggcctccatgctcaacacctgggtg
tctctgaagcaggctgacaagaagctgcaggcctgcagcctgtga
DBGET
integrated database retrieval system
