Coregonus clupeaformis (lake whitefish): 121533966
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Entry
121533966 CDS
T08357
Symbol
socs7
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of cytokine signaling 7
KO
K04699
suppressor of cytokine signaling 6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121533966 (socs7)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121533966 (socs7)
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121533966
NCBI-ProteinID:
XP_041696297
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Position
20:complement(51342088..51348967)
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AA seq
844 aa
AA seq
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MNNAQDMSPDFVLMRLVSAAEDDRLDEENGNLSSGGVVAGLGKEVLAHSNMKGGLEFARD
PTTGLAHSGHLSSLNNAQQSGGTAAPDTGVMATRPSVSIPPPPHSAMEAKGFEFAHRGGL
RPQLLVFPNILRDGEVILDRESDHRNQSREHIGLDKTSGSGSDLSGGINNNTLSAGDAQQ
QNHLSQSWGLHPRAALSTVAADIEGGELCHRHRLITNPSDWPPLSDKSNPLTIIESKWGC
TPGELPDGPVFDLARRFGELGLGAVPKILFKDGEMPQCSCQGAHGPAPAGMGHGDDPTET
SDALLVLEGLGTGDVASLGITGCPEDDSDESRARRVQKMSGAFSLSSFQAELTRQMEGAA
GEPCPSAHGDAQGCSLHGNVPNPTQPSPGDTEQNPEVSTLPGASATTPRSDRLVSPNPSQ
ASTPRKRADKCVSAPRTPTGRGSAGEKTLKVPGKSRKGSLKIRLSKLFRTKSCSGSNSLL
DKRPSVAYSISSAGSLIDMASASGGEHDVDSQPRMTRAQSAFSSASFVPFTGETVSLVDV
DISRRGANTPHPPTPPPPPRRSLSLLDDIGGPQPGPFLVSVMGASLQSLPLPLPPPHPSH
ATIQHSISLNDAFLRALPHSTSSQLLSAPPPSRLAPPPRLCPLRRPEASNFTASLRELEK
CGWYWGPMNWEDAEMKLKGKPDGAFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFS
LWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKS
LQHLCRFCIRQMVRIDHIQELPLPKPLIMYLRKFYYYDAEEEMYLSIKSIRPGAGVEQEA
ESQT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcaagatatgtctcccgattttgtcttgatgcgcctggtttccgcggcc
gaagatgaccgcttggacgaggagaatgggaatctgtcctcgggtggagtggtggcagga
ctcggtaaagaggtcttggctcatagcaacatgaaagggggcttggaattcgcccgagat
cctacgacaggcctcgcgcattccggccatctctcttcgctgaacaatgcacagcagagc
ggcggaacggcggcacctgacacgggagtgatggcgactagaccgtcggtgtctattcct
cctcctccacatagcgccatggaggccaagggctttgagttcgcccacagaggcggctta
cggcctcaactcctggtgtttcctaacatattgagggatggtgaggtgattttagaccgt
gaatccgaccatcggaatcagtcgagggaacatattggtttggacaagacctccggctct
ggctccgacctaagcggaggcatcaataacaatacgctcagcgccggcgacgcgcaacag
cagaaccatctgtcccagagctggggtctgcatccccgggcggcattatccacggttgct
gccgatatcgagggaggtgagctatgccaccggcaccgtttgatcaccaacccatcagac
tggcctccattatcggataaatccaatcctctcaccataatagaatcgaaatgggggtgc
acacccggggagctccccgacggcccggtgttcgacctggccagaaggttcggggagctg
gggctcggcgcggtacccaagatattattcaaggacggggagatgccccagtgctcttgt
cagggcgcacatgggccggcaccggcggggatggggcatggggatgacccgactgagact
agcgatgctttgttagtgctggagggcctggggactggggacgtggccagcctgggtatc
acaggctgccccgaggacgattcagatgaaagtcgagcacgtcgagttcagaagatgtcc
ggtgcattttctctcagtagctttcaagcagagttgacaagacagatggaaggggcggct
ggagagccttgtccgtcggcgcacggtgatgcacaaggatgtagcctgcatggaaacgta
cccaacccaactcaaccgagccctggagatacagaacagaatccggaggtgtcgacatta
cctggggcctctgcgactacaccgaggtcggaccgacttgtcagtccaaaccctagccag
gcatcgacaccccggaagcgggcggacaagtgcgtcagtgcgccccggactccaaccggt
cggggaagcgctggagagaaaacactaaaagttccagggaagtccagaaagggctcactt
aaaatacgcctgagtaaacttttcagaactaaaagctgtagtggttccaatagccttctg
gataagaggccatcagtggcctattcaatctcctctgctggaagtctgatagatatggcc
agtgcaagtggtggggagcatgacgtggacagccaaccccgaatgaccagggcccaaagt
gccttctcttctgcttcatttgttcctttcactggtgagactgtttcattggtggatgtg
gatatttcgaggagaggggcgaacactccgcaccctcccacgcctccacctccgccacgc
agaagtctcagtctattagatgacataggtgggccgcagcctggtcctttcctagtgagt
gttatgggggcctccctacagtccctccccctgcctcttcctcctcctcatccctcccat
gccaccatccagcatagtatcagcctcaatgatgcattcctccgggccctgcctcactcc
acctcttcacagctcctctcagcccctcccccttccaggttggccccacccccaaggctc
tgtcctctgaggaggcctgaggccagcaacttcaccgctagtctgagagagctggaaaag
tgtggctggtactggggtcctatgaactgggaggatgcagagatgaagttgaaggggaag
cctgacggggcgttcctggtgagggacagctctgacccccgctacatcctcagcctcagc
ttccgctcccagggagtcacacaccacacgcgcatggagcactacagagggacattcagc
ttgtggtgtcaccccaagtttgaggaccgatgtcattctgtggtggagtttatcgagcga
gccatcatgcactccaagaacggaaaattcctctacttcctgcgatcacgtgtgccgggg
ctcccccctaccccggtgcagctgctctacccagtgtcccggttcagcaacgtcaagtcc
ctgcagcacctctgtcgcttctgcatccgacagatggtccgcatcgaccacatccaggag
ctgccgctgcccaaaccgctgatcatgtacctgaggaagttctactactatgatgcagag
gaagagatgtacctgtcaatcaagagcattcgaccaggggctggagtagagcaagaggcg
gagtctcagacgtaa
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