Coregonus clupeaformis (lake whitefish): 121534351
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Entry
121534351 CDS
T08357
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
cclu04217
Necroptosis
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121534351 (sqstm1)
04137 Mitophagy - animal
121534351 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
121534351 (sqstm1)
04218 Cellular senescence
121534351 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534351 (sqstm1)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121534351 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121534351 (sqstm1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Cargo receptors
121534351 (sqstm1)
Pexophagy
121534351 (sqstm1)
Aggrephagy
121534351 (sqstm1)
Xenophagy
121534351 (sqstm1)
ER-phagy
ER-phagy recepters
121534351 (sqstm1)
Other autophagy associated proteins
Midbophagy
121534351 (sqstm1)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121534351 (sqstm1)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121534351 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
121534351
NCBI-ProteinID:
XP_041696953
LinkDB
All DBs
Position
2:complement(31401552..31405854)
Genome browser
AA seq
455 aa
AA seq
DB search
MSMTVKAYLLGKEHIPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDD
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFTFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPIVHPNVTCDECEGPVTGTRFKCTVCPNHDLCSPCQAKGLHK
EHVLLPIWHPFNNTFEWFPRGKWMRKMRHCMWAQAQSQAQPGPSVSQPGQAAPEDSQPSS
DASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNPTPPGSGG
YPSAMSDNGTGGSEGAGAKEGDMEVDELSSLGSASGLAKGGDEEWTHLTSKEVDPSTGEL
QSLRVGEEDSLEALGSITPPQGPSQEPQKSLTLAEAAAYPHLPQDADPRLVESLSQMLSM
GFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacataccgaaagaaattcgt
cgctttgctgtcgaccaagatgtttcaacgagttttgagtatctgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccttaccaaatgttttacaaagacgaggacgat
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgcgagttccctgctttt
gccttcccgggcggtgtccctcctttcaccttcccccctcaccctggagcgccccatatg
ggacctcctccaccccatggcccaccaccccatggtcacggcccccacgggccccccatt
gtgcaccccaacgttacctgtgatgaatgcgagggcccggtgacggggacccgtttcaag
tgcaccgtgtgccccaaccacgacctatgctccccgtgccaggccaaggggctccacaaa
gagcacgtcctcctgcccatctggcatcccttcaacaacacattcgagtggttccctcgt
gggaagtggatgcggaagatgaggcactgcatgtgggctcaggcccaaagccaggcccag
cctggtccctctgtgtcccagccaggccaggcggcccccgaggacagtcagccctcctct
gatgcctcatctgcttcctcccagcagtcccaggccaatatggattacctgaagaacatt
ggagaaggggtggcagccatgcttagcccactgggtatcgatgtggatattgacgtggag
cacgaggggaagaggaccaaggtgatgacccccaacccgaccccacctgggtcaggaggc
taccccagtgctatgagtgacaacgggacaggggggtcagagggagcaggggctaaagag
ggagacatggaggtggacgagctgagcagcctggggagcgccagtggtttggctaagggt
ggtgacgaggaatggactcacctgacctccaaggaggtggacccctctacaggagagctc
cagtctctcagggtgggcgaggaggactcactggaagccctagggtccatcacccctccc
cagggtccctcacaggaaccacagaagtccctcactctcgctgaggccgcagcctacccc
cacttgcctcaagatgcagacccacgcctggtggagtccctgtcccagatgctgtccatg
ggcttcacagacgagggtggctggctcacccgtctcctccacaccaaggactgcgacgtc
ggggccgccctggacaccatccactactccaaaccaccccagaagtaa
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