Coregonus clupeaformis (lake whitefish): 121534725
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Entry
121534725 CDS
T08357
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
cclu03260
Virion - Human immunodeficiency virus
cclu04020
Calcium signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04144
Endocytosis
cclu04672
Intestinal immune network for IgA production
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121534725
03260 Virion - Human immunodeficiency virus
121534725
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121534725
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121534725
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121534725
09142 Cell motility
04810 Regulation of actin cytoskeleton
121534725
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121534725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121534725
04050 Cytokine receptors [BR:
cclu04050
]
121534725
04090 CD molecules [BR:
cclu04090
]
121534725
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Chemokine
CXC Chemokine
121534725
Cytokine receptors [BR:
cclu04050
]
Chemokine receptors
CXC Chemokine
121534725
CD molecules [BR:
cclu04090
]
Proteins
121534725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
121534725
NCBI-ProteinID:
XP_041697241
LinkDB
All DBs
Position
21
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AA seq
373 aa
AA seq
DB search
MSYYEHFVITESDYDYNDTSSGFGSGLGDFGTGFEEPCDRELLSPSVQRVFLPVVYGFIF
TLGITGNGLVVFVLGCQRKARLSLTDRYRLHLSAADLLFVLALPFWAVDAALGDWRVGAV
MCVGVHVIYTVNLYGSVLILAFISLDRYLAVVKATDTSTTHTRQLLACRLVYAGAWLPAG
LLAIPDMVFARTQEAGEGEMVCTRLYPPENAPLWVSLFHLQTVLVGLVVPGLVLLVCYCV
IVSRLTRGPLGGQRQKRRAVRTTVALVLCFFLCWLPYCIGIAVDALLRLELIPRGCTLES
GLGVWLAVSEPMAYAHCCLNPLLYAFLGVGFKSSARRALTLTRTSSLKILPRRRTGAMTS
TTTESESSSLHSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcctattatgagcactttgtgataacagaatcggattatgactacaatgacacgagt
tccggttttggttctggcttgggcgatttcggcactggatttgaggagccgtgtgaccgt
gagctgctgagccccagcgtgcagcgtgtcttcctcccggtggtgtacggtttcatcttc
accctggggatcactgggaacggcctggtggtgttcgtactgggctgccagcggaaggcc
cggctcagtctaacggaccgctaccggctgcatctctccgctgcagacctgctcttcgtt
ctggcactgcccttctgggctgtggacgctgcactcggggactggcgcgtcggagcggtc
atgtgcgtgggcgtgcacgtcatctacacagtgaacctgtacggcagtgtgctgatcctg
gccttcatcagtctggaccgctaccttgcagtagtcaaagccacagacaccagcaccaca
cacacccggcagctgctggcatgcaggctggtgtacgctggcgcctggctgcctgctggt
ctcctggccatcccagacatggtgttcgctcggacccaggaggcaggggagggggagatg
gtgtgcacgaggctctacccgccggagaacgccccactgtgggtgtccctgttccacctg
cagacggtgctggtggggctggtggtgccgggcctggtgctgctggtgtgttactgcgtg
atcgtgtccaggctgacccgggggccgttggggggtcagaggcagaagaggagggcggtg
cggaccactgtggctctggttctctgtttcttcctctgctggctgccgtactgcattggc
atcgccgtggatgcgctcctccgcttggagctgatccctcgtggctgtacgctggagtca
ggcctgggggtgtggttagcggtgtctgaaccaatggcgtatgctcactgctgcttgaat
ccgctgctctatgccttcctgggagtggggttcaagagttctgctcgccgcgccctcaca
cttacccgcacctccagcctgaagattctcccgcgtagacgaacaggcgccatgacgtcc
acgacaacagagtcagaatcatctagtctgcactccagctaa
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