Coregonus clupeaformis (lake whitefish): 121535098
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Entry
121535098 CDS
T08357
Name
(RefSeq) glycogen debranching enzyme-like
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00500
Starch and sucrose metabolism
cclu01100
Metabolic pathways
Module
cclu_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
121535098
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
121535098
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
121535098
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
121535098
NCBI-ProteinID:
XP_045062188
LinkDB
All DBs
Position
21:complement(22549695..22604876)
Genome browser
AA seq
1538 aa
AA seq
DB search
MSLQANQVRVLVLKDMEQLERTLFRLDQGFELQFRLGPTLQGKHVRVQTNYPAPGEHFDR
HTFRTLDWHNPTGREDDSDKFCSLDLQIAGSYQYNFGHGHEEKSGGGYLVVDPVLRAGAD
NHHVHLDCITIQTYLSKCLGHLDDWPDRLRVAKESGYNMIHFTPLQKLGKSRSCYSLADQ
LSLNPEFSPPGKNYTWTDVGELVQKLKKEWNMICITDVVYNHTAANSPWIKEHPECGYNL
VNSPHLRPAWVLDRAIWHMTCNMADAKYATNGLPALVKNEGHLNAIRDVLWGQVFPKIKL
WEFFQVRIESAVEEFRDLLVDGEKPDQKKTGGKQGLKIIQDPKFRRFGNEVDMDSALETF
VPHSHSTQAILEACNRLWGRLEEINKEQYQQMLHHQEQATNCIVGNVVYERLADHGPKLG
PVTRKDPIVTRYFTFPFEEKSLEDDLKMMDQPDNACHFLAHNGWVMGDDPLRNFAEPGSN
VYIRRELICWGDSVKLRYGDKPEDCPYLWAHMQKYTEITAKHFAGVRLDNCHSTPLHVAE
HMLAAARAVRPNLYVIAELFTGSELIDNVFVNRLGITSLVREAMSAGDSHEEGRLVYRYG
GEPVGAFVQPSLRPLVPSIAHAMFLDVTHDNECPIQLRSAYDSLPSSAIVSMACCCSGST
RGYDEMVPHQISVVKEERFYPKWNPDAKASSPGEVNLKTGIIAGKLALNKMHQDLALKGF
NQVYVDQVDEDVVAVTRHCPSTHQSVVAVCRTAFHNPKHHQYRKEVPPMFIPGKIDEVVL
EARIIDRQAGTYKKCEKYINGMPEYTVEIKEHIQLKDSGVVKHAGVTSKGSSEFVQEIVF
ERLTPGSVIAFRVSLDPRAQELVGIIRHHLIQFSPKYKLGSLPDQHTPTILETPLAQIMS
KLTLADMNMLLFRCDSEEQEEGGGCYNIPSWTSFKYSGLQGLMSVMADIRPKNDLGHPVC
NNLRQGDWMIDYVSNRLVSRGGALGEVGKWLEGMFHYLKHIPRYLIPCYFDAILVGAYTT
ALDITFNKMSSFVQNGSTFVKLLALGSVQMCGVGSFPALPPLSLALPDVPYSLNKDTGKK
EQCCVSLAAGLPHFSSGIFRCWGRDTFIALRGLMLVTGRHLEARNIILAFAGTLRHGLIP
NLLGEGISARFNCRDAVWWWLQCIQDYCTLVPEGTAILHCPVVRMYPHDDSEPHAPGTPF
SFTQSLCDVIHETMTRHMQGIDFRERNAGPKIDMHMKDEGFNVVAKVHRYTGFVYGGNRF
NCGTWMDKMGESDKARNKGMPATPRDGSAVEMVGLSKSAVRWLVELHKKGLFPHSSMKID
RDGKELKVSYEDWNHKIQVNFEKNFYVSHDEKDPNEKHPDLVHKRGIYKDSHGASSPWCD
YQLRPNFCIAMVVAPELFTVERAWKALEVAEKKLLGPLGMKTLDPDDMVYCGVYDNALDN
DNYNVARGFNYHQGPEWLWPIGYFLRAKLYFAKKLGKETYDQTVYLVKSILSQHYVHLER
SSWKGLPELTNENGQYCPFSCESQAWSISTVLEVLYDM
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccaggcaaaccaagtccgagtcctggtcctcaaagatatggaacagctggaa
aggacactcttccgcctggaccaaggctttgagctccagttccgtctgggccctactctc
caggggaaacatgtgcgtgtgcagactaactaccccgccccaggggaacactttgaccgt
cacaccttccgaaccctggactggcacaaccccacgggaagagaggacgactctgacaag
ttctgctctttagacctacagatcgctggatcgtaccaatacaattttggtcacggccat
gaggagaagtcaggcggtggctacttggtggtggacccagtgctgcgtgccggagctgac
aaccaccacgtccatctggactgtatcaccatccagacctacctgtccaaatgcctcgga
cacctggatgactggccagacagactgagggtggctaaagagtccggctacaacatgatc
cacttcacgcctctgcagaagctcggtaaatctaggtcctgctactccctagctgaccaa
ctaagcctgaacccagagttttcgccaccgggaaagaactacacatggacagatgtggga
gagttggtgcagaaactgaagaaagagtggaatatgatctgtatcactgacgtggtctac
aatcatacagccgccaacagcccatggatcaaggagcaccctgagtgtggctacaacctg
gtcaactccccccacctgaggccagcctgggtcctggaccgggccatatggcacatgacc
tgcaacatggctgacgccaagtacgctactaacggccttcccgccctggtcaagaatgag
gggcacctcaatgcaatccgcgatgttctgtgggggcaggtgttccccaagatcaagctg
tgggagttcttccaggtcagaatcgagagcgctgtggaggagttcagggacctgcttgta
gatggagagaaaccagaccagaagaagactgggggtaaacagggactgaagatcattcag
gacccaaagttcagacgcttcggaaacgaagtggacatggactctgctctggagaccttt
gtgcctcacagccacagtacacaagccattctggaggcctgtaataggctgtgggggaga
ctggaggagatcaataaagagcagtaccagcagatgctacaccaccaggagcaggccact
aactgcattgtgggaaatgttgtttatgagcgcctggctgaccacggacccaaactgggc
cccgtcaccaggaaagaccctattgttaccagatacttcacctttccgttcgaggagaag
agcctggaggatgacctgaagatgatggaccagccagacaacgcctgtcacttcctggct
cacaacggctgggtgatgggagacgaccctcttagaaactttgctgagccaggctctaac
gtgtacatcaggagagagctgatctgctggggcgacagcgtcaagcttcgctacggcgac
aagcccgaggactgcccctacctgtgggcccacatgcagaagtacacagagatcacagcc
aagcacttcgccggagtccgcctggacaactgtcactccacccccctgcacgtggctgag
cacatgctggcagcagccagggctgtcaggcccaacctgtatgtgatcgcggagctcttt
acaggcagcgagctcattgataatgtgtttgttaaccgcctggggataaccagtcttgtc
agagaggcaatgagtgcaggggacagtcacgaggagggcaggctggtgtacaggtatgga
ggggagcccgtcggagccttcgtccagcccagcctccggcccctggtgcccagcattgca
cacgccatgttcctggatgtcacccacgacaacgagtgccccatccagcttcgctctgct
tacgactcgctccccagctctgccatcgtttcaatggcctgctgttgctctggcagcacc
aggggatatgatgagatggtgccccaccagatctcagtggtgaaggaggagcgtttctac
cccaagtggaaccctgacgccaaggcctcgtcccccggggaggtcaacctgaagacgggt
attatcgctggcaagctggccctcaataaaatgcaccaggatctggccttgaagggcttc
aaccaggtgtatgtggaccaggtggacgaggacgttgtggcggtgacgcgtcactgtccc
agcacacaccagtctgtggtggccgtgtgtcgcactgctttccacaaccccaaacaccac
cagtacaggaaggaggttccacccatgttcatccctggtaaaattgatgaggtggttctc
gaggcgcgtatcatcgacaggcaagccggcacctacaagaaatgtgagaagtacattaat
ggcatgccggagtacactgtggagattaaggagcacatccagctgaaggacagtggcgtt
gtgaaacatgcaggcgtgacatctaagggcagcagtgagtttgtccaggagatcgtcttc
gagcgcctcacccctggcagcgtcatagccttcagggtgagtctggaccccagggcccaa
gagctggtgggaatcatcagacatcacctgatccagttcagcccgaagtataagcttggc
agtctgcccgaccagcacacaccaaccatactggagacacccctggcacagatcatgtct
aagctgaccctggccgacatgaacatgctgctgttccgctgtgactctgaggagcaggag
gaaggaggaggctgctacaacatcccctcctggaccagcttcaagtacagtggcctgcaa
ggtctgatgtcagtgatggcggacattcgtcccaagaatgacttgggccacccggtgtgt
aacaacctgagacagggtgactggatgatcgactacgtcagcaacaggctggtgtcccgt
ggtggcgctctgggagaggtggggaagtggctcgaagggatgttccactatctgaagcac
atccctcgctacctcatcccctgctactttgacgctatcctagtgggagcctacaccacg
gctctggacatcaccttcaacaagatgtccagtttcgtccagaacggctccacctttgtc
aaactgctagcactgggctcggtccagatgtgtggtgttggcagtttcccagctctgccc
cccttgtccctggcgctacccgacgtcccctacagcctcaacaaagacaccggcaagaag
gagcagtgctgcgtctccctggccgcaggtctgccacacttctcctctggaatcttccgc
tgctggggccgagacacctttatcgctctgcgtggactcatgcttgtcactggtcgtcac
ctggaggctagaaacatcatcctggcgtttgcaggcaccctgagacacggtcttatcccc
aacctgttgggcgagggcatcagtgcccgcttcaactgccgtgacgcagtgtggtggtgg
ctgcagtgcatccaggactactgtaccctggtgcccgagggcactgccatcctccactgc
cccgtggtcaggatgtacccccatgatgactccgagccccacgcccctggcactccattc
tcgttcacacagtccctttgtgatgtcatccatgagaccatgactcgccacatgcagggt
atcgatttcagagagcgcaatgccggaccaaagatcgacatgcacatgaaggacgagggc
ttcaatgttgtggccaaagtgcatcgttatactggctttgtgtacggtggcaaccgcttc
aactgtggaacatggatggacaaaatgggagagagcgacaaagctcggaacaagggcatg
cctgccacacccagagatgggtcagcggtggagatggtgggcctcagtaagtctgcagta
cgctggctggtggagctccataagaagggcctgttcccccacagctccatgaaaatagac
agggatggtaaggagttgaaggtgtcctatgaggattggaaccataagatccaggtcaac
tttgagaagaacttctatgtgtcccatgatgagaaggaccccaacgagaagcacccagac
ctggtccacaagagaggcatttacaaggacagccacggagcctccagcccctggtgtgac
taccagctcaggcccaacttttgcatcgccatggtggtggctcctgagttgttcacggtg
gagagagcctggaaggccctggaggtcgctgagaagaagctgctaggacctctgggaatg
aagaccttggatccagatgatatggtgtactgtggtgtctatgacaacgccctggataat
gacaactacaatgtggccagaggcttcaactaccaccaaggaccagagtggctgtggcca
attgggtacttccttcgagcaaagctctattttgccaagaagcttgggaaggagacctat
gaccagacagtgtacctggtgaagagcattctctctcagcattatgtccacctggagagg
tctagttggaagggtctgccagagctgaccaatgagaatggccagtactgccccttcagc
tgcgaatcacaggcctggtccatctccacggtgttagaagtcctctacgacatgtaa
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integrated database retrieval system