KEGG   Coregonus clupeaformis (lake whitefish): 121535426
Entry
121535426         CDS       T08357                                 
Symbol
tpm4b
Name
(RefSeq) tropomyosin 4b isoform X1
  KO
K10375  tropomyosin 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260  Cardiac muscle contraction
cclu04261  Adrenergic signaling in cardiomyocytes
cclu04814  Motor proteins
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121535426 (tpm4b)
   04820 Cytoskeleton in muscle cells
    121535426 (tpm4b)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    121535426 (tpm4b)
   04261 Adrenergic signaling in cardiomyocytes
    121535426 (tpm4b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121535426 (tpm4b)
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     121535426 (tpm4b)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ PUMA_CC ATG16 DUF3450 ERM_helical SlyX CENP-F_leu_zip FPP Crescentin Fez1 Laminin_I DUF4200 AAA_13 DUF1664 TMF_DNA_bd XhlA
Other DBs
NCBI-GeneID: 121535426
NCBI-ProteinID: XP_041698410
LinkDB
Position
21:53878695..53894832
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAETDKKSAEDKCKQLEDELLGLQKKLKGTEDELDKY
SEALKDAQEKLELSETKATDAEGDVAALNRRIQLVEEELDRAQERLSTALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEISELKCGELEEELKNVTNNLKSLEAQSVKYSEKEDKYEDEIKVLSDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALTDMTAI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagctagacaaagagaacgccatcgac
cgggcggagcaggcagagaccgacaagaaatccgctgaggacaaatgcaaacagttggaa
gatgaactgctggggctgcagaagaagctgaaggggacagaagatgagctggataaatac
tctgaggctctgaaggatgcacaggagaaactggagctgtcagagacgaaggctactgac
gcggagggtgatgtggcggctctgaaccgtaggattcagctggtggaggaggagttggac
agggctcaggagaggctgtctactgccctgcagaaactagaggaggctgagaaggctgct
gacgagagcgagagaggcatgaaggtgatagagaaccgggcctccaaggacgaggagaag
atggagatccaggagatgcagctaaaggaggccaagcacatcgctgaggaggctgacagg
aagtacgaggaggttgctcgtaaactggtcatcctagaaggggaactggagagggcagaa
gagagagcggagatctctgagcttaaatgtggtgaactggaggaagaactgaaaaatgta
accaacaacctcaagtccctagaggctcagtctgttaagtattcagaaaaagaagacaag
tatgaggacgaaatcaaagtgctgagtgacaaactgaaagaggctgagactcgtgctgag
tttgcagagagatcggtggctaaactggaaaagaccattgatgacttagaagatgaactg
tactctcagaagctgaagtacaaggccatcagtgaggagctggaccacgccctcactgac
atgaccgccatatag

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