Coregonus clupeaformis (lake whitefish): 121535426
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Entry
121535426 CDS
T08357
Symbol
tpm4b
Name
(RefSeq) tropomyosin 4b isoform X1
KO
K10375
tropomyosin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121535426 (tpm4b)
04820 Cytoskeleton in muscle cells
121535426 (tpm4b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121535426 (tpm4b)
04261 Adrenergic signaling in cardiomyocytes
121535426 (tpm4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121535426 (tpm4b)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121535426 (tpm4b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
ATG16
DUF3450
ERM_helical
SlyX
CENP-F_leu_zip
FPP
Crescentin
Fez1
Laminin_I
DUF4200
AAA_13
DUF1664
TMF_DNA_bd
XhlA
Motif
Other DBs
NCBI-GeneID:
121535426
NCBI-ProteinID:
XP_041698410
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All DBs
Position
21:53878695..53894832
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AA seq
284 aa
AA seq
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MEAIKKKMQMLKLDKENAIDRAEQAETDKKSAEDKCKQLEDELLGLQKKLKGTEDELDKY
SEALKDAQEKLELSETKATDAEGDVAALNRRIQLVEEELDRAQERLSTALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEISELKCGELEEELKNVTNNLKSLEAQSVKYSEKEDKYEDEIKVLSDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALTDMTAI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctagacaaagagaacgccatcgac
cgggcggagcaggcagagaccgacaagaaatccgctgaggacaaatgcaaacagttggaa
gatgaactgctggggctgcagaagaagctgaaggggacagaagatgagctggataaatac
tctgaggctctgaaggatgcacaggagaaactggagctgtcagagacgaaggctactgac
gcggagggtgatgtggcggctctgaaccgtaggattcagctggtggaggaggagttggac
agggctcaggagaggctgtctactgccctgcagaaactagaggaggctgagaaggctgct
gacgagagcgagagaggcatgaaggtgatagagaaccgggcctccaaggacgaggagaag
atggagatccaggagatgcagctaaaggaggccaagcacatcgctgaggaggctgacagg
aagtacgaggaggttgctcgtaaactggtcatcctagaaggggaactggagagggcagaa
gagagagcggagatctctgagcttaaatgtggtgaactggaggaagaactgaaaaatgta
accaacaacctcaagtccctagaggctcagtctgttaagtattcagaaaaagaagacaag
tatgaggacgaaatcaaagtgctgagtgacaaactgaaagaggctgagactcgtgctgag
tttgcagagagatcggtggctaaactggaaaagaccattgatgacttagaagatgaactg
tactctcagaagctgaagtacaaggccatcagtgaggagctggaccacgccctcactgac
atgaccgccatatag
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