Coregonus clupeaformis (lake whitefish): 121535525
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Entry
121535525 CDS
T08357
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121535525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535525
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121535525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
121535525
NCBI-ProteinID:
XP_041698602
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All DBs
Position
21:38156302..38195464
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AA seq
1003 aa
AA seq
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MVAIETSPNSSPSAEWVGCLDKRPVERSGEDVDIILTRLKGVKAFQRFHPSLLLQICSCA
FYEYLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETANHQVNQDAVTICTLGIATAFGES
ILDNTPRHATIVSRETSELLRIEQREFKSLWEKYRQCMAGLLAPPYGAMETGSNNDRLTD
KDGSDPLNFMNKTLNKVPSEKLQRGGKVMRNTILSRAPHMIRDRKYHLKTYRQCCVGTEL
VDWLVQQSTCVHTRSHAVGMWQTLLEEGVLNHVDQELGFQDKYLFYRFLDDEEEDTPLPS
EEEKRESEEELPETILFLAQMGPDALLRMILRKPPGQRTGDDLEIIYDELLHIKALSHLS
NTVKRELASVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVIYGKGVVCTLHEGDDF
GKLALVTDSPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEQAVLVLEKSP
RASSLGNIRYTVMSGTPEKILDHFLETMRMDTHHSDPDPAVDDFVLMHCVFMPNSQFCQL
LMAHYHAVAPPGSEQERLEYAVTCKRRVLNLALRWAAVHKHHLQEEPAALTFLEELYGSV
SSVSNDSRILRALKDFVPDLEKIVKLHSEEAKLKKQKVLLRQFSNGDERLAKTQPIRNCD
DILLKVYCSDHTYTTIRVAVAATGREVTSAVANKLASNDDLLLVHLSSAGEKQMLKPNDV
SVFSSLSINGRMFACPRDQLNALTPLPDQEGPSAGSMSSFELMSSKDLAYQMTLYDWELF
SCVHEHELLYHTFGHQSFRRTTANLDLFLRRFNQVQLWVVTEVCLCGQLSKRVQLLKKFI
KIAAHCREFKNLNSFFAIIMGMSNPAVSRLTQTWEKLPSKFKKFYAEFESMMDPSRNHRA
YRLTVTKIEPPIIPFMPLLLKDMTFSHEGNKTFIDNMVNFEKMRMIANTIRAVRHCRSQP
FNPEVCQPNKNHAEVRGYVRKLCVIDKQRTLTTLSYRLEPRRT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctatagaaacatcacccaactcgtctccttcggctgaatgggtcggctgtttg
gataaaaggcctgtggagcgttcaggagaggatgtggatattattctgaccagacttaaa
ggggttaaagccttccagaggttccacccctccctcctgctgcagatatgctcctgtgcc
ttctacgaatacctggagaaaggcatcaccttgttccgccagggtgacataggaaccagc
tggtatgctgttctgtctggctccctggatgtcaaggtgtcagaaacagccaaccaccag
gtaaatcaggatgctgtcaccatctgcacgctgggaatcgcgacggcgtttggagagtcg
attctggataatactcctcgccacgccactatcgtcagcagagagaccagcgaactgctc
cgcatcgaacagagagagttcaagagtctatgggagaagtaccgtcagtgtatggctggc
cttctggcccctccctatggtgccatggagactggatccaacaatgacaggctgacagac
aaagacggttcagatcctctcaacttcatgaacaagactctcaacaaggttccatcagag
aagctgcagcgaggggggaaggtgatgcggaacaccattctctccagagctcctcacatg
atcagagacaggaagtaccacctcaagacatacaggcagtgttgtgtaggtacagagctg
gtagactggctggtgcagcagagtacctgtgtacatactcgctctcacgctgtggggatg
tggcagactctgctggaggagggagtcctgaaccacgtggaccaggagctgggtttccag
gacaagtacctgttctatcgtttccttgacgatgaggaggaggacaccccattgcctagc
gaggaggagaagagggagagtgaggaagagctgcctgagacaatcctctttctcgcccag
atgggacctgacgccctgctgcgcatgatcctccgcaaacctcctggtcagaggacaggt
gatgatctggagatcatctatgatgagctgcttcacatcaaggccttatcccacctctcc
aacactgtgaagagggagctggcgagtgttctcatcttcgagtctcatgctaaagcagga
accgtgttgtttaaccagggagaggagggcacatcctggtacatcatccagaagggctct
gtcaatgtggtcatctacggcaagggtgtggtgtgtaccctgcacgagggagatgacttt
gggaagctggcgttggtgactgactctcctcgagctgcctccatcgtcctcagagaagac
aactgtcacttcctccgagtggacaaggaagacttcaacaggatactcagggacgtagag
gcaaatacagtgcgtttgaaggaacatgagcaggctgttctggtcttggagaagagtccc
agagcgtccagtctgggaaacatcaggtacactgtcatgtctggaacccctgagaagatc
ctagaccacttcctggagaccatgaggatggacacacaccactctgacccagaccctgcg
gtagatgactttgtcctcatgcactgtgtcttcatgcctaacagccagttctgccaacta
ctcatggcacactaccatgcggtggctcccccgggttcggagcaggagaggttggagtac
gctgtgacctgtaagagacgagtcctcaatctggccctgcgctgggctgcagtacacaaa
caccacctacaggaggagccagcagcactcacattcctggaggagctgtatgggagtgtg
tccagtgtgtccaatgactcacggatcctcagagctctgaaagactttgtacctgacttg
gagaagatcgtcaaactacattcagaagaggccaaactgaaaaagcagaaggtccttctt
agacagttcagcaacggagacgagagactagcgaagacacaacccatcaggaactgtgat
gacatcctgttgaaggtgtactgcagtgaccacacctacaccaccatccgggttgccgtg
gcagccacagggagggaggtgaccagcgctgtggccaacaaacttgcctcaaacgacgac
ctgctattggtccacctcagctccgcaggcgagaagcagatgctgaagcccaatgatgtg
tcagtattctcctctctgagcatcaacgggcgtatgtttgcctgtccccgggaccagctc
aatgctctgacccctctcccagaccaggaggggccctcagcggggtccatgtccagtttt
gagctgatgagttctaaagacctggcctatcagatgaccctgtacgactgggaactcttc
agctgcgttcacgagcatgagttgttgtaccacacgtttggacatcagagcttcaggaga
accacagccaacctggacctgttcctacgcaggttcaaccaggtgcagctgtgggtggtg
acggaggtgtgtctgtgtggtcagctcagcaaacgggttcagctgctcaagaagttcatc
aaaatcgctgctcactgtcgggagtttaagaacctgaactcgttctttgccattatcatg
ggcatgagcaaccctgcagtcagccgactcacccagacctgggagaaactccccagcaag
ttcaagaagttttatgctgagtttgagagcatgatggacccgtccaggaaccaccgggcg
taccggctgactgtcaccaaaatagagccaccaatcatccccttcatgcccctcctcctc
aaagacatgacttttagtcacgagggcaacaagacattcatagacaacatggtcaacttt
gagaagatgcggatgatagcaaacaccatccgggcggtgagacactgcaggagtcagccg
ttcaaccctgaggtgtgtcagcccaataagaaccatgctgaggtgaggggttatgtcagg
aagctgtgtgtgatagacaagcaacggaccctgacaacgctctcctataggctagagccc
cgcaggacctga
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