Coregonus clupeaformis (lake whitefish): 121535749
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Entry
121535749 CDS
T08357
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00052
Galactose metabolism
cclu00510
N-Glycan biosynthesis
cclu00513
Various types of N-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Module
cclu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cclu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121535749
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121535749
00513 Various types of N-glycan biosynthesis
121535749
00515 Mannose type O-glycan biosynthesis
121535749
00514 Other types of O-glycan biosynthesis
121535749
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121535749
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121535749
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121535749
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121535749
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
121535749
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
121535749
2.4.1.90 N-acetyllactosamine synthase
121535749
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121535749
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121535749
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121535749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
121535749
NCBI-ProteinID:
XP_041698941
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All DBs
Position
21:complement(57591578..57600168)
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AA seq
376 aa
AA seq
DB search
MLDSSLNFRLWKKGCTLVVVLVVINLSLALFYFMGYSNGLSPNQQIQTQTRIETAFITVT
LPWEEIGHHDLNNSVVTLQTPKLQDIHLPNTTTTTTTTTTTTTTLFEKCPDPSPHLVGPL
RVEFSTPVSLDTVRKENPGLQEGGRYKPHDCIALQKVALIIPFRHRDEHLKFWLYYLHPI
LQRQQLDYGVYVINQDGENTFNRAKLMNIGYAEALKEYDYDCFVFSDVDIIPMDDRNTYK
CFSQPRHLSVSMDKFGFRLPYNQYFGGVSSLSKEQFLKINGFPNNYWGWGGEDDDIFNRV
SSRGMSISRPDGEVGKCRMIRHERDILNDPNPQRFDRIQRTRMTMNTDGVNSLKYEVVKV
EKDALFTKITVDVGKP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactcatctctcaactttaggctgtggaagaaaggctgcaccttggttgtagtt
ttagttgttattaatctctcactggctttattttatttcatgggttactcgaatgggttg
tcaccaaaccaacaaatacagacacagacgcgaattgaaacagctttcattaccgtgaca
cttccatgggaagaaattggacaccacgaccttaataacagcgttgtaacattgcaaact
ccgaagcttcaggatatacatttacccaatacaactactacaacaactactaccactact
actactacaactttgtttgaaaaatgtcctgatccgtctccacatcttgtggggcctctc
agggttgagttctctacgccagtcagcttggacacagtgaggaaggagaacccaggtctg
caggaaggaggtcgctacaaaccacatgactgtatcgccctccagaaggttgctctcatc
atccccttccgccatcgtgatgaacacctcaagttctggctctactacctccatcccatc
cttcagcgccaacagctggactatggcgtctacgtcatcaatcaggatggagagaacacg
ttcaacagggccaagctgatgaacattggctatgctgaggccctgaaagagtatgactac
gactgctttgtgttcagtgacgtggacatcatccccatggatgaccgcaacacctacaaa
tgcttcagccagcccagacacctgtctgtctccatggacaagtttggcttcaggttgccc
tataatcagtactttggcggtgtctcatcgttgagtaaggagcagttcctgaaaatcaac
ggctttcccaacaactactggggctggggtggtgaagatgatgacattttcaacagggtg
agctccagaggaatgtccatctctcgtccggatggcgaggtcggaaaatgccggatgatc
cgtcacgaaagagacatactgaacgacccaaatcctcagaggtttgacagaatacaacgc
acgagaatgacgatgaataccgatggtgtcaactctctcaagtacgaagtcgtcaaagtg
gaaaaggatgctctgttcacgaaaatcacagtagatgtggggaaaccttag
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