Coregonus clupeaformis (lake whitefish): 121536016
Help
Entry
121536016 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: mineralocorticoid receptor
KO
K08555
mineralocorticoid receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536016
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121536016
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121536016
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
121536016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121536016
NCBI-ProteinID:
XP_045072132
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
RIHDTEKNRWSHVPSSAMDYCCSGQEAGSLNLNSNSDVLMDIVNASCSXSSNTADGKESN
NNNKEKKKLEQQPTLKLTQNQHQPFVLPXLNSSLHGRKNQRMDSKELSKTVAESMGLYMN
AARRPTLAASPTGGHVXPGKMYPAGFAGALSRGQPVCCAPRVPFYGVPESAQLHPRDCCS
SGTPAGSAILGLSLSCSPPDASSISAPGGSNNLVSSTTSPTCFGGPFACSTISSPTSRTP
PAQLXPTTTPTGGISATCSPAGSSTVGRPAXTSPSLMRPISSPPRAXAGRAPPHPSCSTS
TNMRSSPAPSPTGSTNNTRASPPISSPTTGAPWRVSPSPRPSGSGGFAGRSSPASELGLV
QNDPNSPEGRGDQQLQGVXVPKVESVDGEMFNVGLDHMGMVKXIKMNPDTDYRSMCLGNG
SNNTKCTPFIRQIKSEPNKDAGCMNPQCYSEQQQQNSMGLFQSGPSEITYLSLRDNRLTN
TVPWDLGTSGHEMNSSSKPXRVPHNLLSKVKQENNDGSYYQENNNNAPTPAXGANSGGHC
FHHQIGAQGTMSFARTHQGLRDKPLLNLISVTAXMESRKSRPGMSQGXRGEGYPGHGCMP
DSMSSAALKQQPPTAKVCLVSVGRGCRCRHGSYMRSCKVFFKRAVEGQHNYLCAGRNDCI
IDKIRRKNCPACRVRKCLQAGMNLGAEVXQLGKLKGVNEALALPTQGVGADAPWVWRWRG
YLSLGRKEAXAPAPLTPWKPHGPGGGLVTPLPPPXICSVLGAGIEPXVVFAGYDNTQPDT
TDHLLSSLNQLAGKQMIRVVKWAKVLPGFRGLPIEDQITLIQYSWMCLSSFSLSWRSYKH
TNGQMLYFAPDLVFNEDRDAAGKAATKTPVLGMRQVSQEFVRLQPTYXESLPXECCMLLS
TGKSEGVKVRRKLLEHLHPVPPPVPPPRPSTLSHRSTSTPSLPPSLHPVPPPCPVAAPHP
RPSTPAPPPWVPPQHLHPRAPPLSSTLSRRSTSPRVPPPPSPPPCPAAAPHPPSLPPPLH
SCPVSNTSTPPRPPGLHPARRSTSTPRPSLSPSTLSHRSTSTLGPPPLVPSQHPHPRAPS
TPALSQHFHPRPSTPAPPQHLHPSTPPRSTTTSGPPPGPASGRSTSTPKLLPAAMISLIH
NYASCLHLSSSSWLPLSTLASSSQRGSGRNQAALEEMRXNYIKELRRSVGKATNNSAQNW
QRFFQLTKLLDAMHDLVGEPARLLFLHVRESQALKVEFPEMLVEIISDQIPKVESGNTHT
LTSTRSDCTEP
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
aggatccacgacacggagaagaacagatggtcccatgtccccagcagtgccatggactac
tgctgcagcggccaggaggccggcagcctgaacctgaacagcaacagtgatgtcctgatg
gacatagtcaacgccagctgctccnccagcagcaacacagccgacggcaaggagagtaac
aataacaacaaagagaagaagaagctagagcagcagcctactctcaaactgacccagaac
cagcaccagccttttgttctccccntcttgaacagttccctccatgggaggaagaaccag
agaatggactccaaggagctctccaaaactgtggctgagtccatgggcttgtatatgaac
gcggccaggaggccaacgcttgcggcttcgccaacagggggccatgtgtagcccgggaag
atgtacccagcggggtttgcaggcgccctgtctcgaggacagccagtgtgctgcgcccca
cgagtccccttctacggggttcccgaatcagcccagctccaccccagggattgctgctca
tctggaaccccagcagggtcagccatcttgggcttgtctctgtcctgcagccccccagac
gccagctccatctcagccccgggaggcagcaacaacctggtttcgtccaccaccagcccc
acctgctttggggggccattcgcctgttcaaccatcagtagcccgaccagcagaacgccg
ccggcccagctctagcccacaaccacgcccacaggaggaatctcggccacctgcagccca
gcagggtccagcacggtgggtcgccccgccnncactagcccctcactgatgcggcccatc
tccagcccccccagagcatgagcaggccgtgcgcctccccacccgtcatgcagcacctct
accaacatgaggtcatcgcctgcacccagccccaccggcagcaccaacaacacgagggct
tcaccgcctatctctagtccgaccaccggggccccatggcgggtgtccccgagccccaga
ccctctggcagcggtgggtttgccgggcgatccagccctgctagtgaattgggcctggtc
caaaatgaccccaacagtccagagggacgaggagaccagcagcttcaaggagtttgagtt
cctaaggtggagagcgtggacggggagatgttcaacgtaggcctggaccacatgggtatg
gtgaagnttatcaaaatgaacccggacacagactataggagcatgtgtctgggtaacggt
agcaacaacacaaagtgtacacctttcatcagacagataaagagtgagccaaacaaagac
gcgggatgcatgaatcctcagtgctacagtgagcagcagcagcagaactctatgggtctc
ttccagtcaggtccgtccgagatcacctacttgtctctgagggacaataggctgacgaat
acagtcccctgggatcttgggacctccgggcacgagatgaatagcagttcgaagccgnng
cgtgttccccacaacctcctgtctaaagttaaacaagagaacaacgatggcagctactac
caagagaacaacaacaacgcgcccacgccggcanggggcgctaactcaggcggacactgc
tttcaccaccagatcggagcacaggggacaatgtctttcgcgcgcacgcaccaaggactg
cgggacaaacccttattgaatctaatttctgttaccgcgnngatggagtcgcggaaatcc
cggcccggcatgtcgcagggtncaagaggagagggctatccaggccatggctgcatgcca
gacagcatgtcaagtgcagctttgaagcagcagccgcccacagccaaagtgtgtctggtt
tccgtgggacgaggctgccgatgccgacacgggtcgtacatgcgcagctgcaaggtcttc
ttcaagagagccgtagaaggccagcacaactacctgtgtgccggaaggaacgactgtatc
atcgataagatccggaggaaaaactgtccggcctgtcgagtacggaagtgtctccaagcc
gggatgaatctcggagccgaagtctgacagctaggcaagctgaagggtgtgaacgaagca
ctcgcactccccactcaaggagtgggggcagacgccccctgggtctggaggtggaggggg
tacttgtccctcgggagaaaggaggcctgagcaccagccccactaacaccctggaagccc
cacggccctggaggtgggctggtgacccctctaccgccccctnccatctgcagcgtgttg
ggagctgggattgagccgtaggtggtgtttgcaggctatgacaacacccagcctgacacc
accgaccacctgctgtccagcctcaaccagctggctgggaaacagatgatccgcgtggtc
aagtgggccaaagtacttccaggtttccggggcctgcccatagaggaccaaatcaccctt
atccagtattcttggatgtgtctgtcctccttcagtctcagctggaggtcctacaaacac
acaaacggacagatgctctactttgcccccgacctcgtcttcaacgaggaccgtgatgca
gcaggtaaagcagccacgaaaacacctgtgttgggcatgaggcaggtgagccaggagttt
gtcaggctgcagcccacctactaagagtcccttccanntgagtgctgcatgctgctcagc
acaggtaagtcggaaggtgttaaagtacgaaggaagttattagagcacctccaccccgtc
cctccccccgtccctccaccccgtccctccaccctgtcccatcgcagcacctccaccccg
tccctccccccgtccctccaccctgtccctccaccctgtcccgtcgcagcacctcacccc
cgtccctccacccccgcccctccaccctgggtcccgccgcagcacctccacccccgcgcc
cctcctctgtcctccaccctgtcccgccgcagcacctccccccgcgtccctccacccccg
tcccctccaccctgtcccgccgcagcaccccaccccccgtccctccccccgcccctccac
tcctgtcccgtcagcaacacctccaccccgccccgtccccccggtctccaccccgcccgc
cgcagcacctccaccccgcgtccctccctcagtccctccaccctgtcccatcgcagcacc
tccaccctcggccctccacccctcgtcccatcgcagcacccccacccccgggccccctcc
acccccgccctgtcgcagcacttccacccccgcccctccacccccgccccgccgcagcac
ctccacccctccacccccccccgcagcaccaccacctccggccccccccccggccccgcc
tctggccgcagcacctccacccccaaactacttcccgcagctatgatatctttaatacac
aattacgctagttgcttacacctctcatcatcatcttggcttcctctctctactctcgcc
tccagttcccaaagagggtctggaagaaaccaggcagcgcttgaggagatgaggntgaac
tacatcaaggagctgaggaggtctgtgggcaaggccaccaacaactctgcccagaattgg
caacgcttcttccagctcaccaagctactggacgccatgcatgatctggtgggggaacct
gctagacttctgtttctacacgtccgtgagtctcaggctctgaaggtggagtttccagag
atgctggtggagataatcagtgaccagataccaaaggtggagtcgggcaacacacacacc
cttacttcaacaagaagtgactgtactgagccctga
DBGET
integrated database retrieval system
