Coregonus clupeaformis (lake whitefish): 121536314
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Entry
121536314 CDS
T08357
Name
(RefSeq) interleukin-1 receptor type 1
KO
K04386
interleukin 1 receptor type I
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121536314
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121536314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121536314
04090 CD molecules [BR:
cclu04090
]
121536314
Cytokine receptors [BR:
cclu04050
]
Interleukin receptor families
IL1 receptor family
121536314
CD molecules [BR:
cclu04090
]
Proteins
121536314
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
TIR
Ig_2
I-set
ig
V-set
Ig_6
TIR_2
YLDV-IL18BP-like
Motif
Other DBs
NCBI-GeneID:
121536314
NCBI-ProteinID:
XP_041699522
LinkDB
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Position
23:complement(39928213..39949231)
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AA seq
582 aa
AA seq
DB search
MKLKASNYIAKIRNIMSGEFYLCFLITTLLLHLSHGQEHQGAVEVHHISAGHFFRLKCGD
DDDAEDRTTVTWSRGGNQTLNMTSGVEIREEVLWFLPAHTSHNGHYTCESRSWEKEFVLS
VDTGPCPVPAEIRTVSQGTSGVVFCRQQDVLHLDPTAHIRWFKDCSPVDQHGEKIIEEDG
LKRLRLVNATESHAGVYTCLVEFSLQGRNHTATHSTQLKVNKEKVLLKPQVTYPRKETVM
VEPGSRIELLCSAFLGVGEGTESESSMFWMVDGSHTEHIEQLNVTKTTIHPSSSGVYGRS
TLSIYEVRPEFLNVPISCIARNALGRDIGLLWLQPANHSGFYTCVCLCLAFSMVVLGVAM
CCLFKVDLVLAYRRLRPLVSKKQAPDGKLYDAYVSYLHGDGLSRAEMFALQVLPEVLERR
YGYTLFVSGRDDLPGEAIHDVTSETMRRSRRLIIVLSDQSASPLHPKMDPEDQLPLHQSS
QNRPSYDQQIGLYDALIQNGLRVVLVEIDGKVDYTSLPESLHYIRRKQGALRWRRPRSGK
SSSTASPNGHFWKCLRYHMPSKPEGALKPQPTPGINCSIELY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagcatcaaactacattgctaagattcggaacatcatgtcgggggagttc
tacctctgctttctcattacgactctgttgctccacctctcccatggccaagaacaccag
ggggccgtagaggtccaccacatcagtgcaggtcacttcttccggctgaagtgtggtgat
gacgatgacgctgaggaccgtaccaccgtgacctggagcagaggggggaaccagaccctt
aacatgacctctggggtggagatcagagaggaggttctgtggtttctacctgcccacacc
tcccataatggacactacacttgtgagagcagatcgtgggagaaggagtttgtgctgtct
gtggacacggggccctgtccggtcccagcggagataaggactgtatcccaggggacgagt
ggagtagtgttctgcagacagcaggatgtcctccatctagaccccacagcacacatccga
tggttcaaggactgtagccctgtcgaccagcatggagagaagatcattgaagaagatggt
ctgaagaggctccggttggtcaatgctactgaaagccatgctggagtttatacctgcctg
gtagagttctctctgcaggggagaaaccacactgccacccacagcactcagctcaaagtc
aacaaagaaaaagtcctgttgaaaccccaagtaacctatcccagaaaggaaacggttatg
gttgaaccaggctcaaggatagagctgttgtgttcagcatttctgggggtcggtgaaggt
acggagtcagagagctctatgttctggatggtagatggaagccatactgagcacatagaa
cagctcaacgtgacaaagacaacaatccatcctagtagtagtggggtctatggccggtcc
actctgtctatctatgaggtccgtcctgagttcctcaacgtgcccatcagctgcattgcc
aggaacgccctgggtcgggacatagggttgctctggctccaaccagccaatcacagtggt
ttctacacatgcgtgtgtctctgcctggccttttctatggtggttcttggagtagcgatg
tgctgcctctttaaagtggacctggtgctggcctataggagactgcgccctcttgtgtcc
aaaaagcaagcaccagatggaaagctgtatgatgcctatgtcagttatctccatggtgat
gggttgtccagggcagagatgtttgctctgcaggttctacctgaggtgttggagagacga
tacggatacacactcttcgtcagtggccgggatgacctccctggggaagcgatccatgat
gtcacctcagagaccatgcggagaagcagacggctcatcatcgtcctgtcagaccagagt
gcatcccctctgcaccccaaaatggatcctgaggaccagttaccactgcaccagagctca
cagaaccgccctagctacgaccagcagattggcctgtacgacgctttgatccaaaatggc
ctccgggttgtcctggtggagatagatggcaaggtggactacacttctctgcctgagtca
ctgcactacatcaggaggaagcagggagctctgaggtggaggaggcccagatctggaaag
agcagctccactgcgtcccctaatggccacttctggaagtgtctgagataccacatgccc
tccaagccagaaggggctctgaaacctcagccaacacctgggataaactgtagtatagaa
ctgtattag
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