Coregonus clupeaformis (lake whitefish): 121536465
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Entry
121536465 CDS
T08357
Symbol
tlr7
Name
(RefSeq) toll-like receptor 7
KO
K05404
toll-like receptor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121536465 (tlr7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cclu04054
]
121536465 (tlr7)
Pattern recognition receptors [BR:
cclu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121536465 (tlr7)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
121536465
NCBI-ProteinID:
XP_041699687
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All DBs
Position
23:47443354..47448840
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AA seq
1063 aa
AA seq
DB search
MLSHMMSSECASFQVCGVMLLGLWCSSVLATGGWYPKTLPCDVTLASNDTVVNVDCTERG
LLEVPKDIPRNTTNLTLTINHIPHINSTSFQGLENLTEIDMRCNCVPIKIGPKDRMCTES
VTIKQNTFKDLRNLKALYLDGNQLSSIPKGLPPNLILLSLEVNQIYTILKRNLSDITNVQ
ILYLGQNCYYRNPCNVSYQIEEGAFLQLGNMTVLSLKSNNLSYIPPRLPTSLRELYLYNN
KIEMVTDKDFHNLTQLEILDLSGNCPRCYNAPFPCIPCPNNSLQIDASAFKALPKLRILR
LHSNSLTYVLTEWFQNCTDLRVLDLSTNFLAREITMTYFPRALPNLEELDLSFNYELQRY
PATLRLSPSFSFLKSLKVLRIRAFVFQQLTFKDISPLIPLKNLEVIDLGTNFIKITNLSI
LMELKNFKIINLSDNKISSPSESGQSVAFSGGEALHGSPMSDAGHNRNGEVREIHYFRYD
EYARSCKYKDKEDGMLNSFVNTQCSQFGKTLDISRNNIFFLHSRFLNLADLRCLNLSGNA
MSQSLNGSEFTYLTNLKYLDFSYNRLDLLYSSAFRELKSLVILDISNNNHYFESEGLTHM
LNFTKNLTNLKILLMNYNKISTSTNTELESFSLEKLEFKGNRLDMLWRDGDTRYINYFKK
LLNLRVLDISHNNLNFIPQQVFQGLPDKLTHLHINNNRLKIFSWEKLTILQSLEVLDLSS
NSLSTVPPELSNCTESLKTLLLHRNQISKLSPYFLKDAFSLKHLDLSFNHIQNIEQTSIP
DDVVDHMDTLVLNNNKFMCNCNALMFVMWLNRTMVNIPRLATDVTCAAPGAQRGHPVISL
DLELQACQHNYMSIILYILLTSLVLSFVTLSISSHLFLWDVWYIYHFLLAKFKGYRRLSS
PSAPYDAFVVYDKKDPEVSEWVLKELLVQLEDRGDHPLQLCLEERDWIPGCPLIDNLSQS
IHQSKRTVFILTNKYIKSGDFKTAFYMAHQRLMDERDDVIVLIFLEKVPSHSKYLRLRKR
LYRRSVMEWPTNPQAQQYFWFSLRSVLATDSQKQYSNLFKETL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcacatgatgagctcagagtgtgcatctttccaggtgtgtggggtgatgctg
ctgggcctgtggtgctcctctgtgctggcaactggaggttggtaccccaaaaccctaccc
tgtgacgtcaccctggccagcaacgacaccgtggtcaatgtagattgcactgagagagga
ctcctggaggtcccaaaggacatccccagaaacaccaccaacctgaccctcaccatcaac
cacatccctcacattaactcaacgtccttccagggcctggagaacctcaccgagatcgac
atgcgctgtaactgcgtgcccatcaagatcggccccaaggaccgcatgtgcacagagagt
gtgactatcaagcagaacacctttaaagacctgaggaatctgaaggctctgtatctggat
gggaatcagctctccagcatcccaaagggtctccctccaaacctcattctgctcagttta
gaggtgaatcaaatatataccattctgaaaaggaacctctctgacatcactaacgtacag
attctttacctgggacaaaattgttactatcgtaacccatgtaatgtttcctatcaaatt
gaggaaggcgcatttctacagcttggtaacatgactgtcctatccctcaagtcaaataac
ctatcctacattcccccaagattaccaacaagtctcagagagttgtatctctataataac
aagattgaaatggttactgacaaagattttcataacttaacccaattggagatacttgac
ctaagcggaaactgcccacgatgttataatgcgccatttccttgtattccatgccctaac
aattcacttcagatagacgcaagtgcctttaaagcattgcccaaactgaggatactacgc
ctgcatagtaactccctcacgtatgtccttacagagtggtttcagaactgtacagatctg
cgagtacttgatctctcaaccaactttttagctcgagagataacaatgacttacttccca
cgagctctacccaacctggaagaattggacctgtcttttaactatgagctgcagaggtat
ccagctacactgcgccttagtccctcattctccttcctgaaatccctgaaagtactccgc
atcagggccttcgtcttccagcagctcaccttcaaagacatcagcccactgattcctcta
aagaacctggaggtcattgacctgggcaccaacttcatcaaaataaccaacctcagcatt
ctgatggaactgaaaaacttcaaaataataaatttatctgacaacaaaatatcgtcccct
tctgaaagtggtcagtctgttgccttttcgggaggagaagccctgcatggctcaccgatg
tcagatgctgggcataaccgcaatggagaagtgagagagattcattattttagatacgat
gagtatgctcgcagctgcaaatacaaggacaaggaggatgggatgctgaattcattcgtc
aatacccagtgcagccagtttgggaaaaccctggatatcagcaggaataatatatttttc
cttcactccagattcttgaaccttgctgatcttagatgcctaaatctctctggaaatgcc
atgagccaaagtctaaatggttctgagttcacttacctcactaacttaaagtatcttgac
ttctcatacaatcgtctggaccttctctattcctcagcgtttcgggaactgaaaagttta
gttatcttagatataagcaacaacaaccattactttgaatccgagggtttgacccacatg
cttaatttcaccaaaaatttgaccaatctgaagatattactcatgaactataataagatt
tccacctccaccaacacagagctggagagtttctctctggagaagttagagttcaaaggt
aaccgtttagatatgctatggagagatggcgatacaagatacatcaactacttcaaaaaa
ctgctcaatctgagggtcctagacatctctcacaacaacctcaacttcatccctcagcaa
gtcttccaaggcctgccagacaaactcactcatctccacatcaacaacaacagactaaag
atatttagttgggagaagctgacgattcttcagtccttagaggttctagatctcagcagt
aatagcctatcaacagttcccccagagctctccaactgcaccgaatctctcaagactctc
ctcttacacagaaaccaaatatccaaactctctccgtatttcctcaaggacgcctttagt
ttgaagcatctggatctcagcttcaatcacattcaaaacatcgagcagaccagcatccct
gatgacgttgtcgatcacatggacacgttagtcctgaacaacaacaagttcatgtgcaac
tgtaacgccctcatgtttgtgatgtggctgaaccgcaccatggtgaacatccccagactg
gccaccgatgtgacctgtgctgctccaggagcccagaggggtcatccggtcatatccctg
gacctagaactgcaggcctgccagcataactacatgtccatcatcctctacatccttctc
acatccctggtgctcagcttcgtcaccctctccatctccagccacctcttcctctgggac
gtctggtacatctaccacttcctcctggccaagttcaaaggctacagacgcctgtcctcg
ccgagcgctccctacgacgccttcgtagtgtacgacaagaaggacccggaggtgtctgag
tgggtgctgaaggagctgcttgttcagctggaggaccgcggggaccatcctttacagctt
tgtctggaggaacgagactggatccctggctgccccctgatcgacaacctctcccagagc
atccaccagagcaagaggaccgtgttcatactgaccaacaagtacatcaagagcggggac
ttcaagactgcgttctacatggcccatcagaggcttatggatgagagagatgatgtgatt
gtcttgattttcctggaaaaggtccccagtcactcaaagtacctgagactcaggaagagg
ttgtataggcggtcagtgatggagtggccaacaaatcctcaagcacagcaatacttttgg
tttagcctaaggagtgtactggcaacagacagtcaaaaacaatacagtaatctcttcaag
gagactctttga
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integrated database retrieval system