Coregonus clupeaformis (lake whitefish): 121536486
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Entry
121536486 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu04510
Focal adhesion
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121536486
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121536486
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121536486
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121536486
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121536486
Peptidases and inhibitors [BR:
cclu01002
]
Peptidase inhibitors
Family I32: IAP family
121536486
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121536486
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121536486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
121536486
NCBI-ProteinID:
XP_041699733
LinkDB
All DBs
Position
21:8510504..8523683
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AA seq
467 aa
AA seq
DB search
MSGPRRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPVERHAEVSPTCKFLSCTHRSRVNSLQGAMLTNEPPYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWAPGDTPWGEHSKHFPYCFFILGHDVGNLPSQGGREGEVGETKSCPGSQGPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGATDRVVCFCCGGGLKGWQQNEDPWEEHAKH
YPGCSFLLAEKGQEFVSSVQLQGPGWNNSASSHLNGCSSHETGVLRSAMAQRAVEMGLEP
ALVERTILARIRRAGTGHSTLETLLQDCFNRGPDSDAETFENNDEDPLEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCGAIAQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccaggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggag
aggttggcccgcgctgggttctacttcacaggacaggccgacaaggtgcgctgcttcagc
tgccacaagactgtagagaactggtgtggaggggacacacccgtggagaggcacgcagag
gtctcccccacttgtaagttcctgagctgcacccatcgttccagggttaactctcttcaa
ggtgccatgctgaccaacgaacccccctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtggatgataccacctaccccatggccccgcacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagcgaccgggtgcagtgcttctgc
tgtggagggatgctgggcggctgggcgcccggggacacgccgtggggggagcactccaaa
cacttcccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagggg
gggagagagggagaggtaggggagaccaagtcatgcccaggttctcagggccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctacagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagcagaacgaggatccctgggaggagcacgccaaacac
tatcctgggtgcagttttctgctggcagagaaaggacaagagtttgtcagcagcgttcag
ctacaaggtcctggctggaacaattctgcttcaagtcacctaaatggatgttcaagtcat
gagacaggggtgctgcggtcagccatggcccagagggcggtagagatgggcctggagcct
gccctggtagagaggactatactggcgaggatacgcagggctgggacaggccactccacc
ttggagaccctgctgcaggactgctttaacagaggccctgacagtgatgcagagacattc
gagaacaatgatgaggatccccttgagaagctacggaagctgcagagggagaagcagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcatctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtggcgccatcgcccag
aagataaagacatacatctcctaa
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