Coregonus clupeaformis (lake whitefish): 121536486
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Entry
121536486 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu04510
Focal adhesion
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121536486
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121536486
04217 Necroptosis
121536486
09144 Cellular community - eukaryotes
04510 Focal adhesion
121536486
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121536486
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121536486
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121536486
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121536486
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121536486
Peptidases and inhibitors [BR:
cclu01002
]
Peptidase inhibitors
Family I32: IAP family
121536486
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121536486
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121536486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
121536486
NCBI-ProteinID:
XP_041699733
LinkDB
All DBs
Position
21:8510504..8523683
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AA seq
467 aa
AA seq
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MSGPRRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPVERHAEVSPTCKFLSCTHRSRVNSLQGAMLTNEPPYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWAPGDTPWGEHSKHFPYCFFILGHDVGNLPSQGGREGEVGETKSCPGSQGPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGATDRVVCFCCGGGLKGWQQNEDPWEEHAKH
YPGCSFLLAEKGQEFVSSVQLQGPGWNNSASSHLNGCSSHETGVLRSAMAQRAVEMGLEP
ALVERTILARIRRAGTGHSTLETLLQDCFNRGPDSDAETFENNDEDPLEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCGAIAQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccaggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggag
aggttggcccgcgctgggttctacttcacaggacaggccgacaaggtgcgctgcttcagc
tgccacaagactgtagagaactggtgtggaggggacacacccgtggagaggcacgcagag
gtctcccccacttgtaagttcctgagctgcacccatcgttccagggttaactctcttcaa
ggtgccatgctgaccaacgaacccccctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtggatgataccacctaccccatggccccgcacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagcgaccgggtgcagtgcttctgc
tgtggagggatgctgggcggctgggcgcccggggacacgccgtggggggagcactccaaa
cacttcccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagggg
gggagagagggagaggtaggggagaccaagtcatgcccaggttctcagggccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctacagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagcagaacgaggatccctgggaggagcacgccaaacac
tatcctgggtgcagttttctgctggcagagaaaggacaagagtttgtcagcagcgttcag
ctacaaggtcctggctggaacaattctgcttcaagtcacctaaatggatgttcaagtcat
gagacaggggtgctgcggtcagccatggcccagagggcggtagagatgggcctggagcct
gccctggtagagaggactatactggcgaggatacgcagggctgggacaggccactccacc
ttggagaccctgctgcaggactgctttaacagaggccctgacagtgatgcagagacattc
gagaacaatgatgaggatccccttgagaagctacggaagctgcagagggagaagcagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcatctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtggcgccatcgcccag
aagataaagacatacatctcctaa
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