Coregonus clupeaformis (lake whitefish): 121536508
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Entry
121536508 CDS
T08357
Name
(RefSeq) cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00260
Glycine, serine and threonine metabolism
cclu00270
Cysteine and methionine metabolism
cclu00670
One carbon pool by folate
cclu01100
Metabolic pathways
cclu01230
Biosynthesis of amino acids
Module
cclu_M00035
Methionine degradation
cclu_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121536508
00270 Cysteine and methionine metabolism
121536508
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121536508
Enzymes [BR:
cclu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
121536508
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Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
CRAM_rpt
Motif
Other DBs
NCBI-GeneID:
121536508
NCBI-ProteinID:
XP_041699772
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Position
23
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AA seq
613 aa
AA seq
DB search
MPSVPSSTDTVRPVSSVCPHAAMLHNDDTNANGEAGILNGGSKVNGEAMLNDPKFSMNGS
AQVNGDEVEKDLENAAAGTEERQWIRPDLPSRCTWKLGVSSAESPHCHPKRTEAPRILPN
ILRRIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERAGILKPG
DTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTAARFDS
PESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDSTAEEILEQCDGKVDMLVAGAGTGG
TITGIARKLKERCPNIKIVGVDPEGSILAEPEELNMTDKTQYEVEGIGYDFIPTVLDRSV
IDTWYKSNDEESFAMSRMLIREEGLLCGGSSGTAMSAAVRMSTELKEGQRCVVILPDSIR
NYMSKFLSDKWMCDKGFLSLEDLMVSKPWWWNLTLQGLNLCAPLTVLPSVNIKKTIKILK
EKAFDQAPVVDESGMILGMVTLGNMLSSVLAGKVKASDPVSNVLYKQFKQVQLTDNLGML
SCILETDHFALVVHEQIQYMADGSHCLRQMVFGVVTAIDLLHYITTRERRGSARDRTLSE
CSITSECSLTEEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggttccctccagcacagatactgtgcgccctgtgtcctccgtctgcccccac
gcagctatgctccacaacgacgacaccaatgccaacggagaggccggtattttgaatggg
gggtccaaggtcaacggagaagcaatgttgaatgaccccaagttctccatgaatggatcg
gcccaagtgaatggggacgaggtggagaaggacctggagaacgcagccgcgggcactgag
gagaggcagtggatccgtcctgatctgcccagtagatgcacctggaaactcggcgtgtcc
tctgctgagtcccctcactgccaccctaaacggaccgaagcccccagaattctaccaaac
atcctcaggaggatcggagacacacctctggtccgcatgaacaagatacccaaagccttc
ggcctcaagtgtgaactcttggccaagtgtgagttcttcaatgcagggggcagtgtgaag
gaccgtatcagtctgagaatggtggaggatgcagagagagctggcatcctcaaacctgga
gacaccatcatcgagcccacctctggcaacacaggtattggtctggccctggcctctgca
gtcaaaggctatcgctgcatcatcgtcatgcctgagaagatgagcatggagaaggtggac
gtgctgagagccttgggggcggagatcgtgcgtacccccaccgccgcccgttttgattcg
ccagagtcccacgtgggcgtagcctggcgtctgaagaacgagatccccaactcgcacatc
cttgaccagtaccgtaacgctagcaaccccctagcccactacgacagtactgctgaggag
atcctggagcagtgtgatggtaaggtggacatgttggtggcaggagctggcacaggtggc
accatcactggcatcgcccgcaagctgaaggagagatgccccaacataaagatcgtgggc
gtggaccctgagggttctatcctggctgagccagaggagctgaacatgacagacaagacc
caatacgaggtggagggcatcggatatgacttcatccccaccgtgctcgacagatctgtg
attgacacgtggtataagtccaatgacgaggagtcctttgccatgtcacgcatgctgatt
agggaggaggggcttctctgcggaggtagttcaggcacggccatgtctgcagcagtccga
atgagtacagagctgaaggagggacaacgctgtgtcgtcatcctgcctgactccatccgc
aactacatgtctaagttcctcagtgacaagtggatgtgtgataagggcttcctaagccta
gaggacctgatggtatccaaaccctggtggtggaacctgacactgcagggtctgaacctg
tgtgcccctctcaccgtgctaccctccgtcaacatcaagaagaccatcaagatcctcaag
gagaaggcttttgaccaggcacctgtcgttgacgagtccggcatgatcctagggatggtt
accctgggcaacatgttgtcttcagtgctggctgggaaggtcaaagcatctgaccctgtc
tccaacgtgctctacaaacaattcaaacaggtgcaactgacagataacctgggaatgctg
tcctgtatcctggagacagatcactttgccttggtggtgcatgagcagatccaatacatg
gcggatggctcccactgtctgagacagatggtgtttggggtggtgacagccattgaccta
ctccactacatcaccacgcgtgagaggcggggaagcgcacgggatcgcacgctgtcggag
tgctccataacgtccgagtgctcgctgaccgaagagctgtaa
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