Coregonus clupeaformis (lake whitefish): 121537424
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Entry
121537424 CDS
T08357
Name
(RefSeq) rap guanine nucleotide exchange factor 3-like
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121537424
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121537424
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Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
121537424
NCBI-ProteinID:
XP_041700994
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Position
24:complement(11997283..12044792)
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AA seq
885 aa
AA seq
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MHLFRSYNYRVFPDRYSVETSSIRGISWTPLPEALDTQDTMKQFLSDRILKATRVVYSAL
IERNPDLIRDRKHHLKTYRQCCSGKDLVDWLMKLNKCLQSRSQAVGMWQVLVDEGIIVHV
KQELNFHDKHTQFYRFLDSEFGLNHLTNEKDALNHTANENLYLKHTTNEKDQSDEELQEG
LLLLLQMGPDALLTMILRKCPSQRSAEDLEVIYEELLHVKAAAHLSTSVRKELAAVLVFE
SHAKAGTVLFSQGDKGTSWYIIWKGSVNVITHGKGLVTTLHEGEDFGQLALVNDAPRAAT
IILREDNCHFLRVDKQDFIRILKDVEANTVRLEEHGKAVLVLEKAESTNQGGTGNISKYT
VMSGTPEKILEHLLETVKLDTNGNDAIDPCVSDFLLTHRVFMPSSQLCPALQQHYHAEPS
EGSELEKAAYALNTKQKIVKLIGQWVALFGQILKDDPIAVDFLETLRKEVTGDSRLSSML
REQLRDRRRTRVLENGVESLTRFDWFSSCEEPVGKCLPIRSQDKVLYEIFRPDHTSVTLM
LPVNASVQEVMSSLVNIGGDHVLVKMNSMGDRTQLKLDTTAVYTSLGLNERLFLCTASQV
EQLTPLKEQQGPDQSTMDTLEQMCSKDIASQLTNYDWELFTAMHEVELVYYIFGRHKFPG
ATTANLERFVHRFNEVQYWVVTEVCLCTDLVKRAMLLKKFIKMAVVLKEQKNLNSFFAVM
FGLSNSAVQRLNKTWERVPSKTKRVYCAYERLMDPSRNHRAYRLAVAKLSPPYIPFMPLL
LKDMTFIHEGNKNYTDKLVNFEKMRLIAKTVKIVRGCRSTPYVPSSPQKGLADRMFLEAP
SIRVSTYSEQSLPLRNPSNIRHYVQNFEVIDNQRKLTQLSRGMER
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgttccggagttacaattatcgagttttcccggaccgttattctgtggaaaca
tcgagcattcgaggcatcagttggacccccctgccagaggctcttgacacacaggacacc
atgaaacagtttctgtcggatcgtattctgaaggcaacaagggtggtgtacagtgccttg
atagagcgtaaccctgacctgatcagagacagaaagcatcacctaaagacctacagacaa
tgttgttcggggaaagatcttgttgattggctgatgaagctaaacaaatgcctccaatca
aggagccaggcagttggaatgtggcaagtcctggtggacgaaggaatcattgttcatgtg
aagcaagagttaaacttccatgacaaacacactcaattttaccgcttcctggattcggag
tttggactgaaccacttgactaatgagaaggatgcactgaatcacacagccaatgagaat
ctctacctgaaacacacaaccaatgagaaggaccaatcagacgaagagctgcaggagggt
ttgttgttattactccagatgggtccagatgctcttctgaccatgattttacgtaaatgc
cccagtcagcgaagtgctgaggacctggaagtgatctatgaggagctgcttcatgtcaag
gctgctgctcatctctccacctccgtgcgtaaggagttggcagcagtgctggtgtttgag
tcccatgccaaagcaggcacagtcttgttcagtcagggagacaaaggcacttcctggtac
atcatctggaagggctctgtcaatgtcatcacacatggaaagggtctggtgacgacgcta
catgagggagaagattttgggcagctggccctggtgaacgatgctcccagagcagccacc
atcatcctgagagaggacaactgccacttcctacgagtcgacaaacaggacttcatacgc
atcctcaaggatgtggaggctaacaccgtgcgtctggaggaacatgggaaagctgtgttg
gtgctggagaaggctgagtcgaccaatcagggagggacaggaaacatcagcaagtataca
gtgatgtctggaacaccagagaagatcctagaacacctgcttgagacagtgaagttggat
actaatggcaatgatgctatagatccctgtgtgagcgacttcctactgacccacagggtc
ttcatgccctccagccagctctgcccggccctgcaacagcactatcatgccgagccgtct
gagggctcagagctggagaaggcagcctacgccctcaacaccaagcagaagatagtgaag
ctgattggccagtgggtggcactgttcggccagattctcaaagacgaccctatcgctgtt
gacttcctggagacgctgaggaaagaggtgacaggtgactctcgtctgtccagtatgctg
agagagcagctcagagacaggaggagaaccagagtgctggagaatggtgttgagtcactg
acaaggtttgactggttctccagttgtgaggagccagtggggaagtgtctgccaatcaga
tcacaggacaaagtattgtatgagatctttcggccagaccatacgtcagtcactctgatg
ctgccggtgaacgcctctgttcaggaagtgatgtcatcgctggtaaacataggaggagac
cacgtcctggtcaaaatgaattccatgggagacaggactcagctgaagctggataccaca
gcagtctacacctccctggggctgaatgagagactgttcctctgcactgccagccaggtg
gaacaactgacgcccctgaaggagcagcagggtcctgatcagagcaccatggacactttg
gagcagatgtgttcaaaggacatcgccagccagctcaccaactacgactgggaactgttc
accgccatgcacgaggtggaattagtctactatatatttgggcgacataaattcccgggc
gccaccacagctaacctggagcgtttcgtgcatcgcttcaacgaggtgcagtactgggtg
gtgacggaggtgtgtctgtgtactgacctggtcaagagagccatgctgctcaagaagttc
atcaagatggccgtcgtgttgaaggaacagaagaacctaaactcgttctttgcggtgatg
tttggtctgagtaacagtgctgtacagagacttaacaagacctgggagagagtgccgagt
aagacgaaaagggtgtattgtgcatacgagaggttaatggatccgtcacgtaaccacaga
gcgtacagactggctgtggcaaagctcagtcctccctacatccccttcatgcccctgcta
ctcaaagacatgacattcatccatgagggaaacaagaactacacagacaaactggtcaat
tttgagaaaatgcgcttgattgctaagacagtgaagatagttagagggtgcagaagcacg
ccttacgtgccttcatcacctcagaagggactcgcagacagaatgtttctggaggcgcct
tccattcgggtgtccacatattccgagcaatccctccctctccggaatcctagcaacatc
cgccactatgttcagaactttgaagtgattgacaaccagcgcaaactgacacaactgtcc
agaggaatggagcgctga
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