Coregonus clupeaformis (lake whitefish): 121537704
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Entry
121537704 CDS
T08357
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121537704
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
121537704
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M10
121537704
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_4
Reprolysin_5
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
121537704
NCBI-ProteinID:
XP_041701241
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All DBs
Position
24:complement(49277509..49284602)
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AA seq
677 aa
AA seq
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MRGVLVLFVLGMCMLGGQCVPLKKSVSVTFPGDVLKNMTDTELADSYLKRFGYMNVQHRS
GFQSMVSSTKALMRMQRQMGLEETGTLDKSTVAAMKAPRCGVPDVRSYQTFEGDLKWDHH
DVTYRILNYSPDMGASLIDDAFARAFKVWSDVTPLTFTRLFDGTADIMVSFGKADHGDGY
PFDGKDGLLAHAFPPGEGIQGDAHFDDDENWTLGKGPAVKTSFGNAEGAMCHFPFSFEGK
QYSTCTTEGRSDNLPWCATTADYGRDKKFGFCPSELLYTFDGNSNGNKCVFPFVFLGETY
EGCTKEGRSDGYRWCSTTDNFDKDKKYGFCPNRDTAVIGGNSEGEPCQFPFVFQGVKYDS
CTSEGRGDGRLWCATTSNFDVDTKWGFCQDRGYSLFLVAAHEFGHALGLDHSNIRDALMY
PMYGYVEDFSLHEDDVEGIQYLYGSKTGPDPTPPGPIPTIPSPGPDPSDEPEPDTTTRPV
DPSQDPCQINKFDTITEIDGDLHFFKDGQYWRLSSKTDGGLEGPFSMSERWPALPAVVDT
AFEDLVTKKIYFFSGTRFWVYTGQSVLGPRSIETLGLPSTVEKVEGALQRGNGKVLLFSN
ENFWRLDVEAQKIDKGYPRFTDLVFVGVPVDAHDVFQFMGHSYFCQDHIYWRMNSRRQVD
RVGYVKDDLLKCTDSSN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagttctggttttgtttgtgttggggatgtgtatgctgggtggacagtgtgtt
cccctgaagaaatctgtgtctgtcaccttccctggagatgtcctcaagaacatgacggat
acagagctggcagacagctacctgaagaggttcggctacatgaacgtccagcaccgcagc
ggtttccagtccatggtgtccagcaccaaggccctgatgaggatgcagaggcagatggga
ctggaggagacagggacgctggacaagtctacggtagcagccatgaaggcacctcgctgc
ggggtccctgacgtacgctcctaccagaccttcgagggggacctgaaatgggaccatcac
gacgttacgtacaggatcctgaactactctccagacatgggagcctctctgatagatgat
gccttcgccagagccttcaaagtgtggagtgatgtcacccctctcactttcacgcggctc
ttcgacggcaccgctgacatcatggtgtcatttggaaaagcagaccatggagacggctac
cccttcgatggtaaggacggccttctggcccacgccttcccccctggtgagggtatacag
ggagacgcccactttgatgatgacgaaaactggaccctcggcaaaggaccagctgtgaag
actagctttggcaacgcagagggtgctatgtgtcacttccctttctccttcgagggcaag
cagtattccacctgcaccacagaggggcgctctgacaacctgccctggtgtgccaccaca
gccgactacggcagagacaagaaattcggcttctgtccaagcgaacttctgtacacattc
gacggaaacagcaacggcaataaatgtgtgttccccttcgtgtttcttggggagacatat
gaaggttgcacgaaggagggccgcagtgatggataccgctggtgttccaccacagacaac
tttgacaaggataagaagtatggcttctgtcccaacagagatacggctgtgattggtgga
aactctgagggagagccgtgccagttcccctttgtcttccagggggtgaagtatgactca
tgcaccagcgagggacggggagacggcaggctgtggtgcgccaccaccagcaactttgac
gtagacacgaaatggggcttctgccaagatcgtggctacagtctgttcctggttgcggcc
catgagtttggtcatgccctgggtctggaccactccaacatcagagatgccctcatgtat
cccatgtacggctacgttgaagacttctccctgcatgaagatgatgttgaaggcattcag
tatctctatggatccaagacaggccctgaccccacaccccctggacccatccccactatt
ccttcacctggccctgaccccagcgatgagcctgagcctgacaccaccacacgccctgtg
gacccatcccaggacccctgccagattaacaagttcgacaccatcacagagattgatgga
gatctgcacttcttcaaggatgggcaatattggaggttgtcgagcaagactgatggtgga
ctggagggtccgttctccatgtctgagaggtggccggctctgccagccgtcgttgacaca
gccttcgaggaccttgtgaccaagaaaatctacttcttctcaggcaccaggttctgggtg
tatactgggcagagtgtcctgggaccccgcagcattgagacgctgggtctgccctctact
gtggagaaggtggagggagcattgcagagagggaatggcaaggtgctgctcttcagcaac
gagaacttctggaggctggatgtggaggcccagaaaatcgacaagggatatcctcgcttc
acagacctggtctttgtaggagtccccgttgatgcccatgatgtgttccaattcatgggc
cactcctacttctgccaggatcacatctactggcgaatgaactctaggagacaggtggac
cgtgtgggatacgtgaaggacgacctcctgaagtgtaccgactcctctaactag
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