Coregonus clupeaformis (lake whitefish): 121537887
Help
Entry
121537887 CDS
T08357
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu00604
Glycosphingolipid biosynthesis - ganglio series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121537887
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
121537887
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121537887
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
121537887
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Glycolipid
121537887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Glyco_tranf_2_5
Motif
Other DBs
NCBI-GeneID:
121537887
NCBI-ProteinID:
XP_045075362
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MSWLSILFQLNILSENLSGHIDLCLTVSVMRCLVQKKTCLVILSALLLYVLLHYWTGRAT
TTVDVGPGQSYKAQKVLNDRLQDVPNSSDNIPYVLKESVAGHLALNGCVCVADRKPAIDL
PFAQVLFPRVWTQDDFHTAFQEKELAQVKSHRQQEYNSFQQRYQSPADLLVIAEANSPLQ
YPTQGVEVRPLKTIVIPGLGLKEKHRQLHTVTLTATLGTFDVSATVDGVSVRGQGEMNMT
LSSRHLSTLNRQLQFVTYTNTRFHPRTADTVQFETDGHQSVFTIKVGHAVIPKLYHSAST
GEYNISSLVTIATKTFLRYDKLQDLIDSIRQFYPTVSIVIADDNEHPQPVTGPHIEQYIM
PFGKGWFAGRNLAVSQVTTKYVLWVDDDFLFTSNTRLEKMVEVLEKTTLDMVGGAVREAT
GYTATFRHTISVEEGGEEGDCIHIRNGYHHAIQGFPNCVLADAVINFFMGRTDKVQQVGF
DPRLNHVAHLEFFIDGLGILHIGSCDDIIVNHASKIKLPWGKSDSEKAYAKFRYSSSDAA
QIRNALFYFKNRFKCMSSN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagttggctctctattctcttccagctcaacatcttgtctgaaaacctgagtggtcac
atcgatctgtgtctgactgtgtccgtgatgcgctgcctcgttcagaagaaaacatgcctt
gtcattttatctgcactgctactgtacgtcctcctccactactggactggaagggccacc
accactgttgatgtgggaccaggtcagagctacaaggcacagaaggttctgaatgatagg
ctgcaagatgtcccgaatagttctgacaatatcccatatgtcctgaaggaaagtgtggca
gggcatctggcactgaatgggtgtgtgtgtgtggcagataggaagcctgccatagacctg
ccctttgctcaagtgctgttcccccgtgtctggacccaggatgacttccacacagccttc
caggagaaagagctagcccaggtgaagagtcacaggcagcaggagtacaacagcttccag
cagaggtaccagagtcccgcagacctccttgttatagcagaagccaacagtcccctgcag
taccctacccagggggtggaggttcgccctctcaagactatcgttatccctgggttgggt
ctgaaagaaaagcatagacaacttcatacagtgactcttactgctaccctggggacattt
gatgtgtcagccaccgtagacggggtctcagttagaggacagggagagatgaacatgact
ctgtccagtagacacctctccactctgaacagacaactacagtttgtcacctacaccaac
acccggttccaccccaggactgctgacacagtgcaatttgagactgatggacaccagtca
gtttttaccataaaggttggacatgctgttattcctaaactctatcactcagcttccact
ggagaatacaacataagctcacttgtcaccatagctaccaagacatttctgcgttatgac
aaactgcaggatctgattgacagcatacggcagttctaccccacagtctccatagttata
gcagatgacaacgagcacccccagccagtgacgggtccacacattgaacagtacattatg
ccgtttgggaagggttggtttgcagggaggaatctggctgtctcccaggtgactaccaag
tacgtgctgtgggtggacgatgacttcctcttcacctccaacaccaggctggagaagatg
gtggaggtcctggagaagaccaccctggacatggtgggtggtgctgtgagagaagctaca
ggctacactgctactttccgccacaccatctcagtggaggaagggggtgaggagggggac
tgtatacacatcagaaacggataccatcatgccatccagggctttcctaactgtgtccta
gccgacgctgttatcaacttcttcatggggaggacagacaaggtgcagcaggttggattc
gatcctcgtctgaatcacgtggctcatcttgagttcttcatcgacgggctggggatcctc
cacatcggttcctgtgatgacatcatcgtaaaccatgcatctaagatcaagttgccatgg
ggcaagtcggacagtgagaaggcctacgccaagttccgctactcctcatcggatgctgcc
caaatcagaaatgcccttttttacttcaagaacagattcaaatgcatgtctagtaattga
DBGET
integrated database retrieval system
