Coregonus clupeaformis (lake whitefish): 121538455
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Entry
121538455 CDS
T08357
Name
(RefSeq) vitamin D3 receptor A isoform X1
KO
K08539
vitamin D3 receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121538455
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538455
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121538455
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121538455
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121538455
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121538455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
121538455
NCBI-ProteinID:
XP_041702411
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Position
24
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AA seq
433 aa
AA seq
DB search
MAFTQMQQGVMEAMAVSTSVVGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRR
SMKRKASFTCPFNSSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQKR
KEEEAAREALRPRLNDEQSQVIASLVEAHHKTYDDSYSDFSRFRPPVREGPVTRSASRAA
SLHSLSDASSDSFNHSPESVDSKLMNFSSLLMMYQDSAGSPDSSEDDGSKLSMLPHLADL
VSYSIQKVIGFAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNLEDMSWSCGGGPD
FKYCVKDVTKAGHTLDLLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHAKI
EVLQDRLSEVLQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQL
TPLVLEVFGSEVS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacccagatgcagcagggagtgatggaggccatggctgtgagtacctctgtg
gtggggcctgatgagttcgaccgcaacgcgccgcgcatctgtggcgtctgcggggacaag
gccacaggcttccacttcaatgccatgacctgcgagggctgcaagggcttcttcagacgc
agcatgaagcgtaaggcaagtttcacctgccccttcaacagcagctgcaccatcaccaag
gacaaccggcggcactgccaggcctgccggctcaaacgctgcgtggacatcggcatgatg
aaggagttcatcctgacagatgaggaggtgcagaggaagaaggacctgatccagaagcgg
aaggaggaggaggcggcgcgggaggccctgagacccaggctgaatgacgagcagagccag
gtcatcgcctcattggtggaggcccaccacaagacctatgacgactcctactctgacttc
tcacgcttcaggcccccggtgcgagagggtccagtaacacgcagtgccagtcgtgcagct
tcccttcactctctgtcagatgcctcctcagactccttcaaccactcaccagagtctgtg
gacagcaagctgatgaacttcagcagtctgttgatgatgtaccaggacagtgcaggcagc
ccagactccagtgaggacgacggctccaaactctccatgctgccccacctggctgacctg
gtcagctacagcatccagaaggtcatcggcttcgctaagatgattcctggcttcagaggg
ctcactgctgaggaccagattgccctgctgaagtcaagtgccatcgagataattatgctg
cgttccaaccagtccttcaacctagaggacatgtcctggagctgtggtggtggccctgac
ttcaagtactgcgtcaaagacgtcaccaaggcgggtcacactctggacctgttggagccg
ctggtgaagttccaggtgggcctgaagaaactcaagctccatgaggaggaacacgtgctg
ctcatggccatctgcctgctgtctcctgatcgtccgggggtgcaggaccacgctaagatc
gaggttctccaggaccgtctgtcggaggtgctccaggcctacatcagggtgaaccaccca
ggaggacggctgctctacgccaggatgatccagaagctggccgacctgcgcagcctcaac
gaggagcactccaagcagtaccgctcgctgtccttccagcccgagcacagcatgcagctc
accccgctggtgctggaggtgtttgggagcgaggtgtcatag
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