Coregonus clupeaformis (lake whitefish): 121538457
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Entry
121538457 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04144
Endocytosis
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121538457
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121538457
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121538457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538457
04121 Ubiquitin system [BR:
cclu04121
]
121538457
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121538457
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121538457
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121538457
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
121538457
NCBI-ProteinID:
XP_041702417
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Position
24:22315049..22331559
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AA seq
888 aa
AA seq
DB search
MASSVAKPGPGNGYPMKAQLQVMVLSAKLRENKKNWFGPSPYVEVAVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLIFRVWSHQTLKSDVLLGMATLEVSETLKSNDMNISEVVQTL
HLSADKDQTDVVGDLSVCLDGMQVDPEMFASAAKANSQSTSNGESQHNGDHDVRRSRDGS
PSVDGLEHRASPNERAVAVNGTGSCKGSPALSAGGSRGNPLRPPRPSRPPPPTPRRPTSS
PASSNGSIPTEGSDGPSSETPVRMPAPAGPATDPNAPPPTHDQSQAIAARQAASVAPGPP
RVPTVAAGPLPPGWEQRVDQNGRLYFVDHVEKRTAWEQPEPLPSGWERRVDPMGRVYFVD
HITRTTTWQRPTMETVRNYEQWQHQRNQLQGAMQQFNQRFIFGVSGLQDQVPATENKQFD
PLGPLPHGWEKRTDSNGRVYFVQHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPY
FVDHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRK
TLFEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYA
GKDNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKPWALK
DLESIDPEFYNSLIWIKENDIEECGLEMYFSVDKEILGEITTHELKPDGGEVLVTEENKG
EYIRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLTDWQR
NTIYRHYARSSKQVLWFWQLIKEMDNEKRMRLLQFVTGTCRLPVGGFADLLGSNGPQKFC
VEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcgttgctaaaccaggccctgggaatggctaccccatgaaggcacaactg
caagttatggtgctatcagcaaaactgagagagaacaagaagaactggtttggccccagt
ccatatgttgaagttgcagttgatggccagtccaaaaagacagaaaaatgcaacaacacc
cacagtcccaaatggaagcagccgctcacagtaattgtcactccttttagcaagctcatc
ttccgggtatggagtcaccagaccttgaagtcggacgtattgttaggcatggcaactctg
gaggtcagcgaaacactcaaatccaacgacatgaatatctctgaggtggtgcagaccctg
catctgagtgcagacaaagaccagacagatgtggtgggggacctgtctgtctgtctggac
ggcatgcaagtcgaccccgagatgtttgcctctgctgccaaggccaacagccaaagtaca
tcaaatggggaatcgcaacacaacggggatcatgatgtgaggcggagtagagacggctct
ccttctgtggatggtttggagcacagagcttccccaaatgagcgtgcggtcgcagtgaac
ggcacagggtcttgcaaagggtctcctgctctgtcagcagggggctccagggggaatcct
ctacggccccccaggccctcccgacccccaccacccaccccgcgcagaccaacctcttct
ccagcatcctctaatggttctataccaactgaaggaagcgatggccccagctcagagacc
ccagtccgtatgcctgcacctgcaggaccagccacagaccccaatgccccaccccctaca
cacgaccagagccaagcaatagcagccagacaagcagccagtgttgccccaggccccccc
agagtccccactgttgctgcaggcccactgcctcctggatgggagcagagggtggatcag
aacggaaggctgtattttgtagatcatgtggaaaagaggacagcgtgggagcagcctgag
cctctaccttctgggtgggagcggcgagtggaccccatgggcagggtctactttgtagac
cacatcaccagaactaccacctggcaacggcccaccatggagacagtgcggaactatgaa
cagtggcagcaccaacgcaaccagctacagggtgccatgcagcagttcaaccagcgcttc
atatttggggtgagtgggctccaggaccaggttccagccactgagaataagcagtttgat
cccctgggcccgctgccacatggatgggagaaaagaactgacagcaacgggagagtgtac
tttgtccaacacaccacacggactacacagtgggaggaccctcgcactcaggggttgctg
aatgaaaagcctcttccagagggctgggagatgaggttcactgtcgacggcatcccatac
tttgtggaccacaacaggagagccactacatacatcgaccctcgcactggaaaatcctca
cttgaaaatgggccccagattacttacgtccgagactttaaagccaaagtccagtacttc
agattctggtgccagcaattgtcaatgcctcagcacataaagatcactgtcacccgcaaa
accctgtttgaggactcgttccagcaaataatgagcttcaatgcacaggacctccgcagg
agactatggatcatattccctggggaagaaggcctcgattatggtggggtggcaagggag
tggttcttcctgctgtctcacgaggtgctgaaccccatgtactgcctgtttgagtatgct
gggaaggacaactactgcctgcagatcaaccctgcctcatacatcaaccctgaccacctc
aaatacttcaagttcattggacgcttcatcgccatggctcttttccacgggaagttcatt
gacacaggcttctcactgccgttctacaagcgcatgctgaacaagccatgggcactgaaa
gatctagagtccattgacccagaattctacaattctctcatctggattaaggagaatgac
atcgaggagtgtggcctggagatgtacttctctgtggacaaagagattctgggtgaaatc
accactcatgagctcaagccggacggtggcgaggtcctggtcacagaggagaacaagggg
gagtatattaggcttgtagcagagtggaggttgtccagaggtgtggaggagcagacccag
gccttctttgagggcttcaacgaggtcctcccacagcagtacctgcagtactttgatgcc
aaagaactggaggtgatgctgtgtgggatgcaggagatagacctgacagactggcagagg
aacaccatctacagacactacgcacgcagcagcaagcaggtcctctggttctggcagctc
atcaaagagatggacaacgagaagcggatgaggctcctccagttcgtcacaggcacctgt
cgccttcctgttggaggctttgctgacctattggggagcaatggcccgcagaagttctgc
gttgagaaggtgggaaaggagaactggctgcccagaagtcacacctgcttcaatcgattg
gatctccctccttacaaaagctatgagcagctgaaggagaaattgatgtttgcgattgaa
gagactgagggctttgggcaggagtga
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