Coregonus clupeaformis (lake whitefish): 121538584
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Entry
121538584 CDS
T08357
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121538584
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GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
121538584
NCBI-ProteinID:
XP_041702661
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Position
24:complement(44318619..44400424)
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AA seq
1900 aa
AA seq
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MPPSEKIAVLILGVLVLESSWNAQHSPWLASALQIQQAFASPNQTNNFVVDEVSRKVYLA
TVNMVYQLNGTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQG
VLVVCGSVYQGFCELRKMENISQIAVEFPAQGEKTVFPSMLNIAANHPNASTVGLIFRSH
GGNTRLLVGATYTGAGTPFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSED
NVFKIKQEVKQKNKLNFVHAFIQKTYSYIAINNDANMGHKESQPNSILARICLDTETPRK
STSESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGTGEGLESYLFGVFTKSDRKS
ALCAFRFSDIEEEIRQGRRNCSNSHSSEVQVLDSVIQGSGAACIHKGILVLQPEQLDCGA
AHLQHPLALRRPLRATPLFESLGLSSVVVDNVHDHTVVFLGTSTGRLRKLTLLKNLTVAN
QWALKLPAGESVHHIMTFDPIDRNYLYLMTSHHLLRVKVAACGQYRTCSDCLGASDAHCG
WCTLESRCSIQRECSWGPLARSWIGMGEGPQQCPSMTLTPPEISLSADIKDVGILINGSV
PDLVGSRVECDYGLGVATAATVHLDYGPAQIQTCPLLPRERYPNIPPGRDHLTVPVAIKV
NGTSVVSGSFVIYDCERTGVIHPKTACISCLSTRWRCYWDQDNHSCLSIKDDSKHRLLEN
AASCPSLMAENVAPSPSGMTQDFTLLLSNVEQGEELECDFGNEQRYDSRWLEERSVVKCS
GVTLTTVERSQVFQLILRRKGHLEKYIDSPKPMTVEVYNCEVGSGDCSQCWGREDQGHLC
GWCDNSCRPRDDCQYMSSQCPDPEITRISPRSGPLKGGTLLTVQGRNMGRRAEVVEVSIG
MFPCTILPDQYTVSVELVCVTGEAFDPTNDFVKITVNQKAMGVSREAFSYLVPKLLSMEP
RKGSRSGGTRVTIRGEHLDTGSQVRVKVNGTQECTILTLTEDTIECTMPAALHTHTEAVS
VCVDFEDKPCQSSELITQYIYEKNPSISYIKPRKSYLSGGRTITVTGQGFDLVQSVTMEV
LDIGQAACKVRPPSMITCSSPASRQSQQATVEFFLNGVLYTGDSPVFYGPGQEEEEEPHG
GHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSNLELAPEEYSVTIGSYPCDIS
FHNDQLFHCSINGSLGSSEGELPVTVQVGNFQRIIAKVQLGGSELAIVVSIVVCCILLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNSSQG
IPFLEYKQFVTRTFFPKMYSDYERSLVQPVYENNALGPRALPETHPLLQDWQPSNTAKPN
MEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGVPFFLLLSAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLVVRVMNTDTICQVKD
KILDAFYKNLPFSQWPQAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIP
EGASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDELFENKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYR
NQVVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggagaagatagctgttctgattcttggcgttctggtgctggaatcgtcc
tggaatgcccagcacagcccgtggcttgccagcgcgctacagatccaacaggcgttcgcc
tcaccaaaccagaccaataactttgtggtggatgaggtgagtagaaaagtctacctggct
acggtaaacatggtctaccagcttaacgggaccctgagcgtggaggtggagaagagaacg
gggccggtggaggacaacctgttgtgccatgcgccgcagctgccccaagcgccctgcgag
caccccaaatccctcaccgacaacttcaacaagctgctcgagctggaccgggagcagggg
gtgctggtggtatgcggctcggtgtaccagggcttctgtgagctcaggaagatggagaac
atctctcagatagcggtggagtttcccgctcagggcgagaagaccgtgttccccagcatg
ctgaatatcgccgcgaaccaccccaacgcttccaccgtggggctcatcttcaggagccat
ggggggaacacccgactcctcgtcggggccacttacaccggcgctgggaccccgtttttc
cccaagaaccacagcaaggaggacctgcgcttcgagaacactcccgaaatcgctattcgg
tccctgaacatcaatgatttatctaggctgttcacctatgacatcaacccgtccgaggat
aacgtcttcaagatcaaacaggaggtgaagcagaagaataaactaaacttcgtccatgcc
ttcattcagaagacctactcttatattgctatcaacaatgacgcgaatatgggacacaag
gagagccagccgaacagcatcctggccaggatatgcctggacaccgagaccccccgaaaa
tccacctcagagagccgtaaactcactgagtccttcatccagatgccgctccagtgtgga
tataacgggaacatctacaaccggctcgtctccgttcaccccgcggagatccactcgggg
accggagaggggctggagtcgtacctgttcggagtattcaccaaatcagacagaaagtct
gcactgtgtgcgtttcggttctcagacattgaggaggagatccgtcagggccggaggaac
tgctccaattcccacagcagcgaggtgcaggtactggacagcgtcatccagggctcgggc
gcagcgtgcatacacaaagggattctggtgctgcaaccggagcagctggactgtggagcg
gcccacctgcagcacccactggccctacgaaggcccttgagggccacacctctgtttgag
tccctgggcctcagctctgttgtcgtggacaatgtacatgaccacaccgtggtgtttctg
ggcaccagcactggacgactgcgcaagctgaccctcctgaagaacctgactgtggccaat
cagtgggctctgaagctcccagccggcgaatcagtgcaccacattatgacctttgacccc
atagacaggaactacctctaccttatgacttctcaccatctcctgagggtaaaggtagca
gcatgtggacagtacagaacctgcagtgattgtctgggggccagcgacgctcactgtggc
tggtgcacactggagagcaggtgttccatccagagggagtgttcctgggggcctctggcg
cgctcctggatcgggatgggcgaaggtccccagcagtgcccctccatgactctcaccccc
ccagagatcagcctgtccgctgacatcaaggatgtggggattctgataaacggcagtgtc
cctgatctggttggttcgcgggtggaatgtgactatggattgggcgttgccacggcagcc
acggtgcacctggactacggcccagcccagattcagacctgccccctactgcctcgggag
aggtaccccaacatcccccctggcagagatcacctgacggttcccgtggcgataaaggtg
aacggcacgtccgtggtttccgggagcttcgtcatctatgattgcgagaggacaggagtg
atacaccccaagactgcgtgtatcagctgtctgagcaccaggtggaggtgttactgggac
caggacaaccactcttgcctctccattaaagatgactccaagcatagactgctagagaat
gctgcttcctgtccaagccttatggcagagaatgttgcaccttcgccctcggggatgacc
caggacttcaccctgttgctaagcaatgtggagcagggggaggagctagagtgtgacttt
gggaacgagcagcggtatgattcccgatggctggaggagcgctcagtggtcaagtgcagt
ggagtgacgctaaccacagtggagaggagtcaggtgtttcagctcattctacgtagaaag
ggacacctggaaaaatacatcgacagccctaaacccatgacagtggaggtatataactgt
gaggtgggcagtggggactgttcccagtgttggggacgtgaggaccagggacatctgtgt
ggctggtgtgacaacagctgtagacccagggacgactgccagtatatgagtagccagtgt
cctgaccccgagatcaccaggatctccccccggagtgggccgttgaagggaggtaccctg
ctcacggtgcagggtaggaacatggggcgcagggctgaggtggtggaggtctccatcggg
atgttcccatgtacaatccttcctgaccaatacactgtctctgtggagctggtgtgtgtt
actggggaggcctttgatcccacaaatgatttcgtcaaaattactgtgaaccagaaagca
atgggggtgtccagagaggccttctcatacttggtccccaagctgctgtccatggagcct
agaaagggctctcgttctgggggaaccagggtgaccatcaggggggagcacctggacact
ggctctcaggtcagagtcaaggtcaatggcacccaggaatgcaccatcctcacgctaact
gaagacaccatcgagtgcaccatgcctgcggccctgcacacacacactgaggcggtgtcg
gtgtgtgtggactttgaagacaaaccctgtcagagctctgagctcatcacccagtacatc
tacgagaagaaccccagcatcagctacatcaaacccagaaagagctacctcagtggcggt
cgaaccatcacagtgacggggcagggttttgacctggtgcagagcgtcactatggaggtg
ctagacatcggacaggcggcctgtaaggtgcggcctccatccatgatcacatgctcctcc
cccgcctccagacaatctcagcaggccacggtagagttcttcctgaacggagtcctctac
acgggagatagccctgtcttttacggcccaggccaggaggaagaagaggagcctcacgga
ggtcacttcctgttggagtacgtggaggaccctcagttcttcactgccaacaaggagaag
ctgatcaaacaccaccctggggagccactcacactcattatcaacaaaggaccgagcaat
ctggaactggcgccggaggaatactcagtaacgattggctcctatccatgtgacatcagc
ttccataacgaccagctcttccactgcagcatcaacggctcgctgggctccagtgaagga
gaactgcctgtcaccgtgcaggtgggtaacttccagaggatcatagccaaggtgcagctg
ggtggtagtgagctggccatcgtggtgtccatcgtggtgtgctgcatcctgctgctgctg
tgcactgtggctctggtggtgtactgtactaagagccggagggcggagcgctactggcag
aagactctgctgcagatggaggagatggagtcccagatcagagaggagatccgcaaaggc
tttgcagagctgcagacagatatgacagacttgactaaggagctgaacagcagccaggga
atccccttcctggagtacaaacagtttgtcacacgcactttcttcccaaagatgtattca
gactatgagaggagtctggtccagcccgtctatgagaacaacgccctcggtccacgagcc
ctccctgagacacacccccttctgcaggactggcagccctctaacacagccaagcctaac
atggaagagggcataactctcttctccacccttctcaacaacaagcacttcctggttacc
ttcgtccacgcgctggagcaacagaaggactttgccgtacgcgacaggtgtagcctggcg
tccctgctcactatcgccctccatggtaaactggagtactacaccagcattatgaaggat
ctgctggtggacctgatcgatgcctcggccgccaagaaccccaagctgatgctgcgacgc
acagagtctgtggtggagaagatgctcaccaactggatgtccatctgcatgtacagctac
ctcaaggagacagtgggcgtgcccttcttcctactactgtctgccatcaagcagcagatc
aacaagggttctatagacgccatcacagggaaggcccggtacaccctcaacgaggagtgg
cttctcagagagaacattgaggccaagccacagaacatcaacgtgtcgttccagggctgc
gggatggactctctggttgtgagggtgatgaacacagacaccatctgccaggtgaaggat
aagattctagatgccttctataagaacctgcccttctcccagtggccccaggcagaggac
gtagacctggaatggtttgcgtctggtagcaacagcaggatcctccaggacctggataac
acttcagtgatggaggatggcaggaagaaactcaacacagtcacgcattaccagatccca
gagggggcgtcgttcgccatgagcatgaaagacaagagagacaacaccctggggagagcc
aaagacttggacacagagaaatatgtccatttggtcttgcctcatgatgagctgtttgag
aataagaagtcccacagacagagtcaccgtaagaaggtcctccctgagatctacctgaca
cgcctcctctccaccaagggaacgttgcagaagttcctggatgaccttttccaggccatc
ctcagtattcctgcagagcgtcccccactggccatcaaatacttctttgacttcctggag
gagcaggcggacaagagaggcatcaccgaccctgacaccctgcacatctggaagaccaac
agtttacccctgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatt
gataagacagatcacatggatgcctgtctgtctgtcatcgcccaggccttcatagacgcc
tgctccatttcagacctgcagctgggcaaggactctcccactaacaagctgctgtatgcc
aaggagatcccagagtacaagaagagggtgcagtgctactacaagcagatccaggagatg
gcgccactgagtgagcaggagatgaacgcccacttggccgaggagtcacggaaatacaga
aatgagttcaataccaacctggccttgacggagatctacaaatacgccaagaaatacaga
aaccaggtggtgagtgctctggagtccaaccccacagcaaagcgtactcagctccaccac
aagtttgagcaggtcattgctctggtggaggacaacatctatgagtgcagcagtgaggcc
tga
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