Coregonus clupeaformis (lake whitefish): 121538602
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Entry
121538602 CDS
T08357
Name
(RefSeq) mothers against decapentaplegic homolog 5 isoform X1
KO
K16790
mothers against decapentaplegic homolog 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121538602
09133 Signaling molecules and interaction
04081 Hormone signaling
121538602
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
121538602
NCBI-ProteinID:
XP_041702713
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Position
3:complement(723044..750950)
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AA seq
469 aa
AA seq
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MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEMCEYPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNMTHNEPHMPLNATFPESFQQH
SGGSGTSFPISPNSPYPPSPASSGGVGTYPNSPASSGPSSPFQLPGRSDTPPPAYMPPDE
QMGQEGSMETTSSSGPRNMPSGDVQPVEYEEPSHWCSIVYYELNNRVGEAYHASSTSVLV
DGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIFVQ
SRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSF
VKGWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatgtccagcctgttctccttcaccagcccagctgtgaagcgtctgctgggg
tggaagcagggggacgaggaggagaaatgggctgagaaggctgttgacgccctggtcaag
aaactgaagaagaagaagggagccatggaggacctggagaaagccctcagcagcccagga
cagcccagtaagtgtgtgaccattcctcggtctctggacggtcgtctccaggtgtcccac
aggaagggtctcccccacgttatctactgcagggtgtggcgctggcccgacctgcagtct
caccatgagctcaagcccctggagatgtgtgaataccccttcggctccaaacagaaggag
gtctgcattaacccctaccactacaagagggtagagagcccagttctccctccggtgttg
gtgcctcgccacagtgagttcaacccacaacacagtctcctggtccagtttaggaacatg
actcacaacgagccccacatgcccctgaacgccaccttcccagagtccttccagcagcac
agtgggggcagcggtacctccttccccatctcccctaactccccctaccccccctcccca
gcctccagcggaggggtgggcacctaccccaactctcctgccagctccggaccctccagc
cccttccagcttccaggtagatctgacaccccacccccggcctacatgccccctgacgag
cagatgggacaggaggggtccatggagaccaccagcagcagcgggcccaggaacatgcct
agtggggatgtgcagccagtggagtatgaggaacctagccactggtgcagtattgtgtac
tatgagttgaacaacagagtgggtgaggcctaccatgcctcttctaccagcgtcctggtg
gacggcttcaccgacccctccaacaacaagaatcgcttctgcctggggttgctctccaac
gtcaaccgcaactcaaccatagagaacacacgccgccacatcggcaaaggggtccacctg
tactatgtaggaggtgaggtctatgcagagtgtctgagcgacaccagtatcttcgttcag
agtcgtaactgtaactaccaccacggtttccaccccaccacggtgtgtaagatccctagt
ggctgcagtctgaagatctttaacaaccaggaatttgcacagctactggcccagtctgtt
aaccacggctttgaggctgtctacgaactcaccaagatgtgcaccatccgcatgagcttt
gtaaagggctggggagctgagtatcaccgacaagatgtcaccagcaccccctgttggata
gaagtgcaccttcacggccctctgcagtggctggataaagtgctgacacagatgggctct
cctctcaaccccatctcttcagtgtcctaa
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