Coregonus clupeaformis (lake whitefish): 121538624
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Entry
121538624 CDS
T08357
Name
(RefSeq) beta-1,4-galactosyltransferase 5
KO
K09905
beta-1,4-galactosyltransferase 5 [EC:
2.4.1.274
2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Module
cclu_M00066
Lactosylceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121538624
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121538624
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121538624
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.274 glucosylceramide beta-1,4-galactosyltransferase
121538624
Glycosyltransferases [BR:
cclu01003
]
Glycolipid biosynthesis
Glycosphingolipid
121538624
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121538624
SSDB
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Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
121538624
NCBI-ProteinID:
XP_041702741
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All DBs
Position
24:complement(57107137..57207332)
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AA seq
381 aa
AA seq
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MPRQLRFRKRSFLGFIFIFSLSTSALYFLYSAPGVVNEYLFMVQATGIHFKENVKNIGTQ
VLEQVVRGGYNVNGTDYAYDFNMSENDVPPTTYLPEGFTYLPSQICPERLPSMKGRLEVN
MSEIALEDVERILLNAEPSMALGGFWKPRDCVPRWKVAILVPFRNRYEHLPILLRHLVPA
LQKQRLQFAFYVVEQVGIEPFNRAMLFNVGFREAMRDLDWDCVVFHDVDHILENDRNYYG
CGDMPRHFAVKLNKYSYMLPYNEFFGGVSGLTVEQFTKINGFPNAFWGWGGEDDDLWNRV
QYANYTVSRPQGEWGRYMSIPHHHRGEVQFLGRYTLLRHSKERQSLDGLNNLHYSPLVSR
RPLYTNISVSLSRKLAPIADY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacagttgcgatttcggaaaaggtcattccttgggtttatattcatcttctca
ctgtccacctccgcattgtacttcctctattctgcgcctggtgtcgtaaatgagtacctg
tttatggtgcaggccacagggatccacttcaaggagaacgtgaagaacatcggtactcag
gttctagagcaggtggtcagagggggctacaacgtcaatggaacagattatgcctatgac
ttcaacatgagtgagaatgatgtgccgcccaccacatatctcccggagggcttcacctat
ctgccctcacagatatgcccagagagactgccctccatgaaggggaggctggaggtgaat
atgagtgagatagctctggaggacgtggagaggattctcttgaatgctgagcctagcatg
gccctgggaggcttctggaagcccagggactgtgtcccacgctggaaggtggcgatactg
gtcccattccggaaccgctacgagcacctgcccatcctgctcagacacctggtacctgca
ctacagaaacagaggcttcaatttgccttctatgttgtagagcaggtgggtattgagccc
ttcaatagggccatgttgtttaacgtgggcttccgggaggctatgagggacctggactgg
gactgtgtggtgttccacgacgtagaccacatcctggagaacgacagaaactactacggt
tgtggagacatgcctcgccacttcgctgtcaaactcaacaagtactcctacatgcttccg
tacaatgagttcttcggtggtgtcagtggtctgacagtggaacagttcacaaagatcaac
ggctttcccaatgcattctggggctggggtggagaggacgacgacctttggaacagggtg
cagtatgccaactacacagtcagtcggccccagggagagtggggccgctacatgtcaatc
ccacaccaccaccgtggagaggtgcagttcctgggcaggtacacacttctacggcactct
aaggagagacagagtctggatgggctcaataacctacattactcccccctagtgtcccgg
aggcctctctacaccaacatatcagtcagcctgagcagaaagctagcccctatagcggac
tactga
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