Coregonus clupeaformis (lake whitefish): 121539549
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Entry
121539549 CDS
T08357
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X2
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539549 (bcl11ba)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121539549 (bcl11ba)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
zf-H2C2_5
DUF3268
DUF7565
Motif
Other DBs
NCBI-GeneID:
121539549
NCBI-ProteinID:
XP_041704057
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All DBs
Position
25:31657163..31715364
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AA seq
847 aa
AA seq
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MSRRKQGNPQHVSQRELIAPAEADHVDGGLSVSDSLTQPQPHPHPQPHPHPQPHPHPLLS
HPALLDPSLSDSLAMGPGDHDLLTCGQCQMNFPLGDILLFIEHKKKQCQALLQGPGCYDK
MAADRSSPSPPHQQQQNQGRHSHSQLRKVVEPVEIGIQVTPEEEEDERLMVTPTKGICPK
QESALAGGRDEPSSYICTTCKQHFPSAWFLLQHAQNTHGIRIYLESNPSSASLTPRITIP
GPPMGQDSIPQSPLTNFLGENNPFHLLRMTGPMLREPPPGFMENRGGLPNTPPFVSPPPR
HHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPMAIESQSMDFSRRLRQLAGNNNVATP
PLSPSRANPMHRLLNPNPFQPSPKSPFLSTPPLPPMPPNSTTPPQTQAKSKSCEFCGKTF
KFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKSGSLTGRSDDGLSTTS
SPEPGTSDVTGEGMKNRDGDFRGEGEEEEEEEEEEELENESRPESNFSMDNMEFYRNREN
GSKPPSDEKNALSLGKMVESVGLSTIQQYNNLIVDNRKNRMHFSKRGSDGQRDTGDEDSV
VGEMEREHHHHQMERDHQKPTVNGRNCGSGDSFSGLFPRKPTPITSPCLSNSSTKRIKIE
KDLEMPPAPLIPSENVYSQWLVGYAASRHFIKDPFLGFTHSRQSPFGTSSEHSSENGSLR
FSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKESRRSDTCEYCGKVFKNCSNL
TVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQMVVGWLNRRAKLRSFITRESREI
LGAPCDV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaggggaacccacagcacgtgtcacagagagaattaatagcaccg
gcggaggctgaccatgtggacggcggactgtccgtgtctgactccctcacccaaccccaa
cctcacccccaccctcaacctcacccccaccctcaacctcacccccaccccctgttgtcc
cacccggccctgctggaccccagcctatccgacagcctggccatggggccgggagaccac
gacctgctcacctgtggccagtgtcaaatgaacttccccctgggagacatcctgctcttc
atcgagcacaagaagaagcagtgccaggccctgctgcaaggccccggctgctacgacaag
atggccgccgaccgcagcagcccctccccgccccaccagcagcagcagaaccagggtcgc
cacagccacagccagctgaggaaagtggtggaaccggtggaaatcggaatccaggtgaca
ccggaggaggaagaggacgagaggctgatggtgacgcccaccaaaggaatttgccccaag
caggagagtgctctggcaggaggcagagacgagccttcgagctacatctgcaccacgtgt
aagcagcacttccccagtgcctggttccttctacagcacgcccagaacacccatggcatc
cgcatctacctggagtccaacccctccagcgcatcgctcaccccccgcatcaccatcccc
gggccccccatgggccaggactccatcccccagtcccccctcaccaatttcctgggagag
aacaaccccttccacctgctgaggatgaccgggcccatgctccgggagcccccaccaggc
ttcatggagaaccgtggaggcctccccaacacgcctcccttcgtcagccccccgccccgc
caccacctggacccccaccggctggaacgccttagtgccgaagaaatggggctcatctcc
cagcaccccagtgccttcgagagggtgatgcggctaacgccgatggccattgaatcccag
tccatggacttctccaggcggctccggcagctggcggggaacaacaacgtggccacccct
cctctgtcgcccagccgggccaaccctatgcaccgcctgctcaaccccaaccccttccag
cccagcccaaagtcgccctttctcagcaccccgcccctgccgcccatgccccccaacagc
accaccccaccccagacgcaggccaagagcaagtcatgcgagttctgtgggaagaccttc
aagttccagagcaacctggtggtccaccggcggagccacaccggggagaagccctataag
tgtcagctgtgcgaccatgcctgctcacaggccagcaagctgaagagacacatgaagaca
cacatgcacaagtctggctccctgacaggacggtctgacgacggtctctccaccaccagc
tcgccggagcctggcaccagcgacgtgacaggagagggcatgaagaaccgagatggagac
ttcaggggtgagggcgaagaggaggaagaggaggaggaggaagaggagctggagaacgag
agcaggccggagtcaaacttcagcatggacaacatggagttctaccgtaaccgtgagaac
ggctccaagccgccgtcagacgagaagaatgccctctccctgggcaagatggtggagagt
gtgggcctgagcactatacagcagtacaataacttgatagttgacaatcgtaaaaatcga
atgcacttctccaagagggggtccgacgggcaacgggacactggggacgaggactctgtg
gtgggagagatggagagggagcaccatcaccaccagatggagagggaccaccagaagccc
acggtcaatggcaggaactgtggctccggcgactctttctcaggcctgttcccccgcaaa
cccacgcccatcaccagcccctgcttgtccaactcctccaccaagaggatcaagattgag
aaggacctggaaatgcccccggcgcctctcatcccctctgagaacgtctactcccagtgg
ctggtgggatacgctgcctcacgacatttcatcaaagaccctttcctgggctttacccac
tccagacaatctccctttggcacctcatctgagcactcatctgagaacggcagcctgcgt
ttctccacgcctcccggagacctcctggatggcggcctgtcggggcgcagcggcacagcc
agcgggggcagcactcctcacctggggggcccgggacctggccggcccagctccaaggag
agcagacggagcgacacctgcgagtactgcggcaaggtgttcaagaactgcagcaacctg
acagtgcaccggcgcagccacacgggagagaggccctacaagtgtgagctgtgcaactac
gcctgcgcccagagctccaagctcacccgccacatgaagacccacgggcagatggttgta
ggatggctaaaccgtcgggctaaactgcgcagctttataacgagagagagcagggagatc
ttaggggctccctgtgatgtgtag
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