Coregonus clupeaformis (lake whitefish): 121539881
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Entry
121539881 CDS
T08357
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04068
FoxO signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121539881
04068 FoxO signaling pathway
121539881
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121539881
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121539881
04217 Necroptosis
121539881
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121539881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121539881
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121539881
04090 CD molecules [BR:
cclu04090
]
121539881
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121539881
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Tumor necrosis fators
121539881
CD molecules [BR:
cclu04090
]
Proteins
121539881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
121539881
NCBI-ProteinID:
XP_041704464
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All DBs
Position
26:32943303..32946162
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AA seq
270 aa
AA seq
DB search
MNGTQGYPYPQVFLVDSGGGPQPSVQPPGMLPCWSFPPAHERVRERGRARGVGSWSLAVA
LLFLLLLVFGALGLGAYQIIKLQTQLDGIQQEINIESDGCAPEKLVGDLPETDPETDPNR
GKTAGRPAAHVIGRIEKDVSQNTLRWEPKAGRAFTEGGVVYRDGGLQVNETGLYHIYSRV
QFEANHCTPTDTLVHSVFVRRPGNLKSLTLMEGHRESYCSLGSHGFVWTSGSYLGSTLKL
EKQDWVYVNVSHPAMLSHAHHASFFGLHKI
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtacacagggctatccatacccccaggtgtttctagtggacagtggtggaggt
ccacagccgtcggtccaacctccaggcatgctgccctgctggtccttccctcctgctcac
gagagagtgagggagcggggcagggccaggggggttggctcctggagcctggctgtggct
ttgctgtttctgctgctgctggtgtttggggctttaggactgggtgcctaccagataatc
aagctacagactcaactcgatgggatacaacaggaaattaacattgagagtgatggttgt
gcgcctgagaagctagtgggtgaccttccagagactgatccagagactgatccaaacaga
gggaagacagccggcagacctgcagcacatgtcataggccggattgagaaggatgtttca
cagaataccttgcgttgggagcccaaggcggggcgggccttcacagaggggggcgtggtc
tatcgtgacggcggtctgcaggtcaacgagactgggctctaccacatctactcccgggtg
cagtttgaagccaatcactgcacccctacagacaccttggttcactctgtgtttgtgaga
aggccagggaatctcaagtctctcaccctgatggaggggcacagggagagctactgcagc
ctgggctctcatgggtttgtctggacctcggggagttacctgggatccacactgaagctg
gaaaagcaggactgggtctatgtgaacgtctcccatccagccatgctcagccacgctcat
catgccagcttctttggactccacaagatctag
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