Coregonus clupeaformis (lake whitefish): 121540362
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Entry
121540362 CDS
T08357
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121540362
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
121540362
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
121540362
NCBI-ProteinID:
XP_041705114
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Position
26:complement(41857254..41892836)
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AA seq
677 aa
AA seq
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MNEQPQQRMAAVGTQDKELNDLLDFSAMFAPPVANGKNRPTTLASSQFGGSALDERSGSG
SWGPGEQNSPSFNHGRGYGDGSHYNEHEGLSSPFLSSGIGGKNERVPYSSFGGQPGFLPS
DIAMPSPDAMSPSGLKSASQFYPGSYPNNPRRRPPDGQLDTQPKKIRKPPGLPSSVYASS
SGDEYARDNGGYPGTKPGSVYPGSFYMQEGLHPSSDPWASSGPLGQSGYSAMLGNSPHIG
QPGSFSAINPQDRMVRTAPQYKRQPLPLSPQNYPLHGSEVNGSLPPGFHSGSGSYNHGAD
GIMANRGTTAGSSGDEIGKALASIYPSDHNSNNFSSTSSTPVGSPQGIAGAASQWPRPSG
QSALSPNYEGQLHALQNKMEDRLEEAIHVLRSHAVQGPPGLGGGAHSDMHSLLSAVSSVH
NGGLGGLSQAFSNAGLALSNRHPTMGGNHQEEPTGLPPSNTLLHGHHASGPPQSTGQPEG
FTSLPGSVARSTHSSSGSDIKREDKEDDENSSIADKSEDEKKETKRIRARKEALTNQILS
GLSGLSDPGDDPEDEDDEDLPPEVKVEREKERRVANNARERLRVRDINEAFKELGRMCQL
HLSNDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVAGESPMRLS
GGHPGMGGDGHNPVSHM
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagccgcagcagagaatggctgcagtgggaacacaagacaaggaactcaac
gacctcctggatttcagtgcgatgtttgcaccacctgtggctaatgggaagaacagaccg
acgacacttgctagcagtcagtttggaggatcagctctggacgagcgcagtggctctgga
tcctggggccctggagaacagaacagcccctccttcaaccatggacggggctacggagat
ggctctcactacaatgagcatgagggcctgtcatcccccttcctcagctcaggaatcgga
ggtaaaaatgagagggtaccatactcttcgtttggaggccagcctggcttcctacccagt
gacatcgccatgcccagtccagatgccatgtccccctctgggctaaagtctgcctctcag
ttctaccccggatcgtaccccaacaatcccaggaggaggcctcccgatggccagctagac
acccaaccgaagaagatccggaaaccccctggcctgccttcctcggtgtacgcctcttcc
tccggggatgagtatgcccgtgacaacggaggatatcctggcaccaaacctggctctgtc
tacccaggctctttctacatgcaagagggcctccacccctcctctgacccctgggcctcc
tcaggacctttgggtcagtctggctactctgccatgctggggaactctccccacatcggc
cagcccggctccttctctgccatcaacccacaggacaggatggtgaggacagccccacaa
tataagcgtcaacccctgcctctgtccccacagaactaccctctccacggcagcgaggtg
aacggcagcctcccgcccggcttccactctggctctgggagctataaccacggagcagac
ggcatcatggccaatagaggcaccactgcagggagctcaggagatgagattgggaaggct
cttgcatcaatctacccctcggaccacaacagtaacaacttctcctccacatcctccacc
ccagtaggctcgccccagggaattgcaggagctgcatctcaatggccaagaccttcaggg
cagtctgccctgtcacccaactacgaagggcaattgcatgccctgcagaacaaaatggag
gaccgtctggaggaggccatccacgtgctgcgtagccacgctgtccagggcccgcccggc
ctggggggaggagcccactctgacatgcacagcctgctgagcgctgtgtcctctgtacac
aacggtggcctgggaggtctatctcaggccttctccaacgctggcttggccctcagcaac
agacaccctaccatgggagggaaccaccaggaggagcccacaggccttcctcccagcaat
accctgctgcacggtcaccacgcctccggaccccctcagtccactggacaaccagagggc
ttcaccagtctgcccggaagcgtggcacgctccacacactcgtccagcggctcggacatc
aagagggaggacaaggaggacgacgagaactcctccatcgctgacaagtctgaggacgag
aagaaagaaaccaaacgcattagagcaagaaaggaggcgttgaccaaccagatcctctct
ggcctctcaggcctgtcagacccgggagatgatccagaggatgaggatgacgaggacctt
cctcctgaggtaaaggtagagcgtgagaaagagcggcgagtggccaacaacgcccgtgag
cggctgcgagtgcgagacatcaacgaggctttcaaggagctgggccgcatgtgccagctg
cacctcagcaacgacaaacctcagaccaaactgctcatcctgcatcaagccgtcaacgtc
attctcaacctggagcagcaagtccgagaacgcaacctgaaccctaaagcagcatgtctg
aagcggcgggaggaggagaaagtgtctggggtggcaggggagtcccccatgcggctctca
ggaggccaccccggcatggggggagatggccataacccagtcagccatatgtaa
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