Coregonus clupeaformis (lake whitefish): 121540604
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Entry
121540604 CDS
T08357
Name
(RefSeq) transmembrane anterior posterior transformation protein 1 homolog isoform X1
KO
K23404
transmembrane anterior posterior transformation protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121540604
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121540604
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF747
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
121540604
NCBI-ProteinID:
XP_041705544
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Position
3:complement(11729584..11761777)
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AA seq
622 aa
AA seq
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MADLLETGPSDEKETDNEGKKKVKRPWDDIPRSEKIGRTPDLAETLGFYDINAVRREQRE
RDNSDPSLARFLCAELTRGYFLEHNEAKYTERRERVYTCMRIPRELEKLMIFGFFLCLDA
FLYVFTLLPLRVLLALLHLFTLPCCGLRANVCPYCNRSSGSLLLQPAQVCDILKGLIMVL
CYSMMHYVDYSMMYHLIRGQSVIKLYIIYNMLEVADRLFSSFGQDILDALYWTATEPKER
KRDSIGLIPHFIMAVFYVFLHAILIMVQASTLNVAFNSHNKSLLTIMMSNNFVEIKGSVF
KKFEKNNLFQMSNSDIKERFTSYVLLLIVCLRNMEQFSWNPDHLWVLLPDVFMVIASEIA
VDIIKHAFITKFNEITADVYSEYRASLAFDLVSSRQKNACTDYSDSVARRMGFIPLPLAV
LLIRVLMSSVNVQGALSYSCVFLFYLGMVTLKVLNSIVLLGKSCVYVKRANMEDKLFERP
STAAPGKTSSRTRKTSRCTAPSGDPSGEPWSERSPSTPSCTSVPPSSSVTAQPTPTASPT
LRPETVPPSPSTSTTPASPPSPSTSPEPDPDPDPLTPSPPDPLTPPEQKEEERMEGTELK
HRTPKKDLLDVDRFTICGNRID
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttgttggagaccgggccgtcagatgaaaaagaaaccgacaatgagggcaag
aagaaggtgaaacggccatgggatgacataccaaggtcggagaaaatcggtagaactcca
gatttggcggaaacattgggcttttacgatataaatgctgtcagacgggagcaacgtgaa
cgcgataactcagatccgtcgctggcacgcttcctgtgtgctgagctgacccggggctac
ttcctggagcacaacgaagcaaaatacacggagcgcagagagagagtgtacacatgcatg
cgcattcccagagaactggaaaagctgatgatctttggcttcttcctttgtctggatgcc
ttcctctatgtgttcactttgctgcccctgcgggtgctgctggccctgctacacctcttc
accctgccctgctgcggcctccgggcaaacgtatgcccctactgcaatcggagcagtggc
tcgctcctgctgcagccggcccaggtgtgtgacatcttgaagggactgataatggtgctg
tgctactccatgatgcactacgtggactacagcatgatgtaccacctgatccggggacag
tccgtcatcaaactctatatcatctacaacatgctggaggtagccgacaggctgttctcg
tcgtttggccaagacatccttgacgcgctctactggacggccacagagcccaaagagagg
aagagagacagcatagggctcatcccccatttcatcatggctgtgttctacgtcttcctg
catgccatcctcatcatggtccaggcgtcaacgctcaacgtggctttcaactcccacaat
aagtccctgctgaccattatgatgtccaacaactttgtggagatcaaaggaagtgtgttc
aagaagtttgagaagaacaacctctttcagatgtccaacagtgatatcaaggaacgtttc
accagctatgtgctcctgctcatcgtctgcctcaggaacatggagcagttctcctggaac
ccagatcatctctgggtgttgttacctgacgtcttcatggtgatcgcctcagagatcgcc
gtggacatcatcaaacacgccttcatcaccaagttcaacgagatcacggcagatgtatac
agtgaatacagagccagcttggccttcgatctcgtcagcagtcggcagaaaaacgcctgc
acagactacagtgactctgtagccagaagaatgggcttcattcctcttcctcttgcagtc
ctgctaatccgagtgttgatgagttcagtgaatgtacagggagccctgtcctactcctgt
gtgttcctcttctacttgggaatggtgaccctgaaggtgctgaacagtatcgtgctactg
gggaagtcgtgtgtgtacgtgaagagagccaacatggaggacaaactgtttgagaggccc
tccacagccgcccccgggaagacgtccagtagaaccaggaaaacatccagatgtactgcc
ccctcaggtgatccatcaggtgaaccgtggtccgagcggtccccatccactccttcctgc
acctccgtccccccatcctcctctgtcaccgcccagcctacccccactgccagccccacc
ctgcggccagagactgtacccccttccccctccacttccaccaccccagccagccctccc
agcccctccaccagcccagagccagacccggaccctgaccccctgaccccctcaccccct
gaccccctgaccccccctgagcagaaagaggaggaaaggatggaaggcacagagctcaag
cacaggacccctaaaaaggacctgctggatgtcgaccgcttcacgatatgcgggaaccgt
atcgattga
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