Coregonus clupeaformis (lake whitefish): 121540859
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Entry
121540859 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00062
Fatty acid elongation
cclu01040
Biosynthesis of unsaturated fatty acids
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
Module
cclu_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
121540859
01040 Biosynthesis of unsaturated fatty acids
121540859
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121540859
Enzymes [BR:
cclu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
121540859
Lipid biosynthesis proteins [BR:
cclu01004
]
Fatty acid synthase
Component type
121540859
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
CS
Motif
Other DBs
NCBI-GeneID:
121540859
NCBI-ProteinID:
XP_045063579
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Position
26:45550628..45578613
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AA seq
588 aa
AA seq
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MQQTLTPHVYWAQRHEDIYLRVELIDAQNLDISVHDNVLRFRAQGHGARGENDYEFSLPF
LNAVKTEVSHRSTQRQVNITVRKQLSGWWDRLTLQEKKPLFLAPDFDRWMDESDLEMELR
EKEEKKIRLNMESRVPEDSFITLKKGFLFTYNLVQFLGFSWIFVNMTIRLIVLGQDSLYD
TFYTISDVMFFCQILASVEVLNAMFGVVETAVVPAFIQVVGRNFILFIIFGSLDEMHNKA
VVFTVFYLWSAIEMFRYPFYMLGCIDTEWKTITWLRYTIWIPPYPLGVLAEAVAVVQSIS
VFDQSRLFSIPLPKLGLGSSVSFSYVLYIYLPLMVTSRLFYVLYIYLPLMVISKRLFYVL
YIYLPLMVIGKRLFNVLYIYLPLMVISKRLFYVLYIYLPLMVISKRLFYVLYIYLPLMVI
GKRLFYVLYIYLPLMVIGKSLFYVLYIYLPLMVISKRLFYVLYICLPLMVISKRLFYVLY
IYLPLMVISKRLFYVLYIYLPLMVISKRLFYVLYIYLPLMVIDLPLMVISKRLFYVLYIY
LPLMVISKRLFYVLYIYLPLMVIGLLINVRHLYKQRKKRFRTKKRKSN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagacgttgactcctcacgtgtactgggctcagcggcatgaggacatctacctg
cgagtggagctgattgatgcgcagaatcttgacatcagcgtacatgataatgtcctccga
ttcagggcccagggtcatggagcaagaggagaaaatgattatgagtttagtctgccattt
cttaatgctgtgaagacagaggtgagtcacaggtcgacccagcgccaggtgaacatcaca
gtccgtaagcagctgagcggctggtgggacagactcaccctgcaggagaagaaacctctg
ttcctggctcctgacttcgaccgctggatggacgagtctgaccttgagatggagctacgg
gagaaggaggagaaaaagatccgactgaacatggagtcaagggtgccagaggactcgttc
atcactctgaagaaaggttttctgttcacctataacctggttcagttcttgggcttctcc
tggatctttgtcaacatgaccatcagactcattgtactgggacaagattctctctatgac
acattctacaccatctcggacgtgatgtttttctgccaaatattagccagtgtagaagtg
ctcaacgctatgtttggagtggtcgagactgcggtggttcctgctttcatacaggtggtt
ggtaggaacttcatcctcttcatcatcttcggcagcctggatgagatgcacaacaaagca
gtggtttttactgtcttctacctctggagcgctatagagatgtttaggtatccgttctac
atgctgggttgtatcgacacagaatggaagacgatcacctggctgaggtataccatctgg
atacccccttaccctctgggggtgctggctgaagcggttgcagtggtccagtccatctca
gtgtttgaccagagcagactgttcagtatccctctaccaaagctgggcctgggctcctct
gtcagcttctcctatgtcctctatatctatctacctctcatggtcacttcgagactgttc
tatgtcctctatatctatctacctctcatggtcatcagtaagagactgttctatgtcctc
tatatctatctacctctcatggtcatcggtaagagactgttcaatgtcctctatatctat
ctacctctcatggtcatcagtaagagactgttctatgtcctctatatctatctacctctc
atggtcatcagtaagagactgttctatgtcctctatatctatctacctctcatggtcatc
ggtaagagactgttctatgtcctctatatctatctacctctcatggtcatcggtaagagt
ctgttctatgtcctctatatctatctacctctcatggtcatcagtaagagactgttctat
gtcctctatatctgtctacctctcatggtcatcagtaagagactgttctatgtcctctat
atctatctacctctcatggtcatcagtaagagactgttctatgtcctctatatctatcta
cctctcatggtcatcagtaagagactgttctatgtcctctatatctatctacctctcatg
gtcatcgatctacctctcatggtcatcagtaagagactgttctatgtcctctatatctat
ctacctctcatggtcatcagtaagagactgttctatgtcctctatatctatctacctctc
atggtcatcgggctcctcatcaacgtccgccacctgtacaagcagaggaagaagaggttc
cggaccaagaagaggaaatctaactga
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