Coregonus clupeaformis (lake whitefish): 121541404
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Entry
121541404 CDS
T08357
Name
(RefSeq) F-box/WD repeat-containing protein 2
KO
K10261
F-box and WD-40 domain protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121541404
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121541404
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_TEP1_C
F-box-like
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121541404
NCBI-ProteinID:
XP_041706325
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Position
27:complement(2715184..2721876)
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AA seq
454 aa
AA seq
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MEKAAFEGWLESVSTSFLTLSDQQRNQTLDQLISLSGAVQLRHLSNVLEALLKRDFLRLL
PLELTFYLLHWLDPQTLLTCCLVCKQWNKVISACTEVWQGVCRDLGWRIDDSIQDASHWK
GVYLKAKLRMMQLKDQEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVRTGQC
IYGIQTHTCATVKFDEQKLVTGSFDNTIACWEWSTGVKIQQFRGHTGAVFSVDYNDDLDT
LVSGSADFSVKVWALSAGACLNTLTGHTEWVTKVILQKSEVESMVHCPGDYILLSADKYE
IKVWPIGREINCKCLKTLSVSEDRSVCLQPRLQFDGRYIVCSSDLGVYQWDFASFDILRV
IKTQDPANLSLLSFGEVFSLLFDTDFLYVMDLRTEKITGRWPLPAYRKSKRGSSFLPGVT
SWLNGLDGRNDSGLVFATSMPDHSIHLVLWKENR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcagcctttgaggggtggctggagtcggtctccacctctttcctcacactg
agcgaccagcagcgcaaccagaccctggaccaactcatctcgctgagtggtgctgtccag
ctgcggcacctgtccaacgtactggaggcgctgctcaagcgggacttcctgcgactgctg
cccctggagctcaccttctacttgctgcactggctcgacccgcagaccctgctcacctgc
tgcctggtgtgcaagcagtggaataaggtgatcagcgcgtgcacagaggtgtggcagggt
gtgtgccgggacctgggctggcgcatcgacgactccatccaggacgcgtcccactggaag
ggtgtctacctcaaggccaagctgcgcatgatgcagttgaaggaccaggaggcctttgag
acgtcgtcgctcatcgggcacagtgcgcgcgtctacgccctctactacaaggacggcctt
ctctgcacaggctccgatgacctttctgccaaactgtgggatgtccgcaccgggcagtgc
atctacggcattcagacgcacacctgtgccacagtgaagtttgacgagcagaagctggtg
acggggtcctttgacaacaccatcgcctgctgggagtggagcacgggggtcaagatccag
cagttccgtggtcacacgggtgcagtgttcagcgtggactacaacgatgacctggacacg
ctggtgagcggctcggccgacttctcggtgaaggtgtgggccttgtcggcaggcgcctgc
ctcaacaccctcacgggacacacagagtgggtcaccaaggtgattcttcagaagagtgaa
gtagaatccatggtgcactgtcctggtgactacattctgttgagtgcagataaatatgaa
ataaaggtttggcctataggcagggaaatcaactgcaagtgcttgaagaccctgtctgtg
tcagaggaccgtagtgtgtgtctgcagcctcgcctgcagtttgacggccgctacattgtc
tgtagctcggacctgggggtctaccagtgggactttgccagcttcgatatcctcagggtc
atcaaaacgcaggaccctgccaacctctccctgctcagcttcggcgaggtgttttcgctc
ctcttcgacaccgacttcctgtatgtcatggacctgaggacagaaaagataacgggccgt
tggcctctgcctgcctacaggaagtccaaacgaggttccagcttcctgccgggagtcacc
tcctggctcaatgggctggatgggcgaaatgactctggcctcgtgtttgccacgagcatg
cctgaccatagcattcacttggttctgtggaaagaaaaccgataa
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