Coregonus clupeaformis (lake whitefish): 121541443
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Entry
121541443 CDS
T08357
Symbol
gria2b
Name
(RefSeq) glutamate receptor 2b isoform X1
KO
K05198
glutamate receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121541443 (gria2b)
04082 Neuroactive ligand signaling
121541443 (gria2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121541443 (gria2b)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121541443 (gria2b)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
121541443
NCBI-ProteinID:
XP_041706388
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Position
3:19739015..19819235
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AA seq
897 aa
AA seq
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MPKIMNLSVFFLPVLWGLALGGSQSVQIGGLFPRGADQEYSAFRIGMVQFSTSEFRLTPH
IDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGT
HQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDMAAERKWQVTAINVG
NLKDERKDEAYRSLFQDLENKKERRVILDCEQDKVRDIMEQVITIGRHVKGYHYIIANLG
FVDGDLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSKIRYTSALTYD
SVQVMTEAFRYLHKQRIDIARKGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQF
DQHGKRVNYSVNIMELKNNGPVKIGYWNEVDKMAVTKSDVFPNDTTGMENKTVIVTTILE
APYVMLKKNADLFLDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNG
MVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA
YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGA
FMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQT
EISYGTLDSGSTKEFFRRSKIALFDKMWTYMRSAEPSVFVKTTAEGVLRVRKSKGKYAYL
LESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAK
RMKVTFTDGMRNKARLSITGSTGENGRVMTPEFPKAVHAVPYVRPGMGMNVSLTDLS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagattatgaatttatcggttttctttctaccggttttatggggtttggcgctt
ggtggctctcaaagtgtacaaattggtggactctttccaaggggtgctgatcaggagtac
agtgcatttcggataggaatggttcaattcagcacatccgaattcagattgacgccccat
attgacaatctggaagtagcgaacagttttgccgtcaccaattgtttctgttcccagttc
tcgagaggagtttacgccatctttggattctacgacaagaagtcggtcaacacgataacg
tcgttctgcgggactctccatgtgtcatttatcacccccagcttcccgctggatggaact
catcagttcatcatccagatgaggcctgacatcaaaggacccctactcagcctcattgag
tactacaagtgggacaagtttgcctatctctatgacagtgatagaggtttgaccacgctg
caggtggtgctggacatggctgcggagaggaagtggcaggtgacggccattaacgtgggc
aacctgaaggacgagaggaaagacgaggcctaccgctccctcttccaagacctggagaac
aagaaggagagacgggtcatccttgactgtgaacaggacaaagtccgagacattatggag
caggtcatcaccattggcagacatgtgaaaggctaccactacatcattgcaaatttgggt
ttcgtggatggggacctctccaaaatccaatatggcggagccaacgtgtcaggtttccag
attgtggatttcgatgacccgttggtatccaaatttgaccagaggtgggaggctctggag
gagaaggaataccctggtgccgacagtaagattaggtacacgtctgcgttgacctatgac
tcggtgcaggtgatgacggaggccttccgctacctgcacaagcagcgcattgacatcgcc
aggaagggcaacaacggtgactgtctggccaaccccgccgtgccctgggcgcagggagtg
gagatcgagcgtgcactaaaacaggttcgtgtggacggcctcacagggaacattcagttc
gatcaacacggcaaacgagtcaactactcagttaatatcatggagctgaaaaataatggt
cctgtgaagattggatattggaacgaagttgacaaaatggctgtcacaaaatcagatgtg
ttcccgaatgacacaaccgggatggaaaacaaaactgtcattgtgaccacaatcttggaa
gccccatatgtaatgcttaagaagaatgctgacctttttctagacaatgaaagatacgag
ggctactgtgtagatctggccgctgaaatagccaagcactgcggcttcaaataccagctt
aaaattgtgggggatggaaaatacggagcccgagacgctgagaccaagatctggaacgga
atggtgggagagctcgtctatgggaaagctgatatagccgtggcaccgttgaccatcacc
ctcgtccgagaagaagtcattgacttctccaagcccttcatgtccttggggatctccatc
atgatcaagaagccccagaagtctaaacctggagtcttctctttcctggaccctctggcc
tacgagatctggatgtgcatcgtgtttgcctacatcggtgtgagcgtggtgctcttcctg
gtcagccgattcagcccatacgagtggcacacagaggagtacgaggatggccagatccag
actaatgaatcgaccaacgagtttgggatattcaacagtctctggttctccctcggcgcc
ttcatgagacagggctgtgacatctcgccaagatccctctctgggcgtattgtggggggg
gtgtggtggttcttcaccctcatcatcatctcgtcctacacggccaacctggctgccttc
ctcactgttgagaggatggtgtcgcccattgagagtgctgaggatctggcgaagcagacc
gagatttcctatggaacactggactccggcagtaccaaggagttttttaggcgctccaaa
attgccctattcgataagatgtggacttacatgcggagcgcagagccctctgtgttcgtg
aaaaccacagcagagggggtgctgcgggtgcgcaagtccaagggcaaatacgcctatctg
ctggagtccaccatgaacgagtacatcgagcagaggaagccctgcgacaccatgaaggtc
ggcggcaacctggactccaaaggctatgggatcgccacgcccaaaggatcctcattaaga
aatgcggttaacctcgcagtactaaaactgaatgagcaaggcctgttggacaaattgaaa
aacaaatggtggtacgacaaaggagagtgcggcagcgggggaggtgattccaaggagaag
acgagcgcactcagtctgagcaacgttgctggggtcttctacatcctggtcggcggactt
ggtttggccatgttggtggccttgattgagttctgttacaagtcccgagccgaggcgaaa
cgaatgaaggtgaccttcacggacgggatgaggaacaaagcgaggctgtctataacgggg
agtactggggagaatggccgtgtgatgactccagagtttccgaaagcagtgcatgcagta
ccttacgtgagacctggcatgggaatgaacgtcagcttgacggatctctcctga
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