Coregonus clupeaformis (lake whitefish): 121541633
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Entry
121541633 CDS
T08357
Name
(RefSeq) sequestosome-1-like
KO
K14381
sequestosome 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
cclu04217
Necroptosis
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121541633
04137 Mitophagy - animal
121541633
09143 Cell growth and death
04217 Necroptosis
121541633
04218 Cellular senescence
121541633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541633
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121541633
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121541633
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Cargo receptors
121541633
Pexophagy
121541633
Aggrephagy
121541633
Xenophagy
121541633
ER-phagy
ER-phagy recepters
121541633
Other autophagy associated proteins
Midbophagy
121541633
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121541633
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121541633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
121541633
NCBI-ProteinID:
XP_045065114
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All DBs
Position
3:17568237..17574050
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AA seq
462 aa
AA seq
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MSMTVKAYLLGKEDAPKEIRRIAVDQDVSTSFEYLKKKVEDVFSTLRNVTYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDYTFRLFIKEKKAHRREFPAFAFPGGVPPFAFLPPPGAPHT
GPPPPHGHGPHGHGPHGPPMVHPNVTCDECEGSVAGTRFKCTVCPDYDLCSTCQAKGLHK
EHVLLPIWHPFSNAFEWCPRGGKWMRKMRHCMWAQAQSQAQPGPSVSQPGQAVPGDRQPS
DASSAASQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEVKRTKVMTTNPTPLGSGG
PPSARSDNVTGGSEGAGAKEGDMDVDGLSSLGSTSDLATGGKDAGGSGDEEWTHLTSKEV
DPSTGELQSLRAGKEGSLEVPESPTVPQGPSQEPQKSLTLAEAAAYPHLPQDADPRLVES
LSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKSQQK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtcaaagcctatctccttggaaaggaggacgcaccgaaagaaattcgt
cgcattgctgtcgaccaagatgtttcaacgagttttgagtatctgaaaaaaaaggttgag
gatgttttctcaaccctgcgaaatgtcacctaccaaatgttttacaaagatgaagacggt
gatatgatcgccttttccactgacgatgagcttatcatgggcctcacctgcatcaaggac
tacaccttccgcctcttcatcaaggagaagaaggcgcacaggcgtgagttccctgctttt
gccttccccggcggtgtcccccctttcgccttcctccctccccctggagcaccccatacg
ggacctcccccaccccatggtcacggcccccatggtcacggcccccacgggccccccatg
gtgcaccccaacgtgacctgtgacgaatgtgagggctctgtggcggggacccgtttcaag
tgcaccgtgtgccctgactatgacctgtgctccacgtgccaagccaaggggctccacaag
gagcacgtcctcctgcccatctggcaccccttcagcaacgcattcgagtggtgccctcgt
ggggggaagtggatgcggaagatgaggcactgcatgtgggctcaggcccaaagccaggcc
cagcctggtccctctgtgtcccagccaggccaggcggtcccgggggacagacagccctct
gatgcctcatctgctgcctcccagcagtctcaagccaatatggattacctgaagaacatt
ggagaaggggtggcagccatgcttagcccactgggtatcgatgtagatattgatgtggag
cacgaggtgaagaggaccaaggtgatgaccaccaatccaaccccacttgggtcaggaggc
ccccccagtgctaggagcgacaacgtgacaggggggtcagagggagcaggggctaaagag
ggggacatggacgtggacgggctgagcagcctggggagcaccagtgatttggctacgggt
ggtaaagacgcagggggcagtggtgacgaggagtggacccacctgacctccaaggaggtg
gacccctctacaggggagctccagtctctcagggcaggcaaggagggctctctggaagtc
ccagagtcccctactgtcccccagggtccctcacaggaaccacagaagtcactcactctc
gctgaggccgcagcctacccccaccttcctcaagatgccgatccacgcctggtggagtcc
ctgtcccagatgctgtccatgggcttcacagatgagggtggctggctcacccgcctcctc
cacactaaggactgcgacgtcggggccgccctggacaccatccactactccaaatcccaa
cagaagtaa
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