Coregonus clupeaformis (lake whitefish): 121541644
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Entry
121541644 CDS
T08357
Name
(RefSeq) tight junction protein ZO-2-like isoform X2
KO
K06098
tight junction protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121541644
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
121541644
NCBI-ProteinID:
XP_041706748
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Position
27:23554828..23597109
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AA seq
1223 aa
AA seq
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MKTVLHLHRKWIHTYKAIRILQGLSPVMEETVWEQYTVTLQRDPKMGFGIAVSGGRDNPN
EESGEMSIVVSDVLQGGPADGLLFDNDRVVQVNATPMDGVPHSFAVQTLRKCGKVAKITV
KRPRKVPVNLLKRAPSPDDRVFSNDYNDDYDQDRRSVYSERSSHQDRDHSQERGCYTDAG
YQGRGFDRDYGRDDRGRSMERDLDPDRQYRRDGSMGRTLDRERSPDRRYKSDLTLDRDHS
PDRRYRSERALDRDPSPDRRFRSERTLDRTNSPDLRYRAGHSPARSHGRDHSFESYRERV
PSDRDHRKEQMKRSGSRERLDRSPSPAAMPVPMARPPREQEPLEKPLSVLLLKNRPNEEY
GLRLGSQLFIKEMTSTGLACRDGNLQEGDIILKINGTVTENLSLSDAGKLIEKSRGKLQL
VVQRDRRQVLIRIPPLADSDSELDDISEIESYRSYSPQDDRRAPHSDLSSHSSNERLRDK
PREEPPSRLAKMGAMPTPFAMPARKPDRVVEDTPPLPAEREEPRPETPPAPVVTVAPKVH
AAPKVPLRPSIEDQEIYGPNTVMVRFQKGESVGLRLAGGNDVGIFIAGIQEDSPAEQEGL
HTGDQIMKVNNMDFRGMVREDAVLYLLEIPKGDDVTILAQSKPDVYKDILASGRGDSFFI
RTHFEYDKEVPQSLPFFRGEIFKVTDTLYDGKLGNWLAIRTDKDNQLLEKGIIPNKSRAE
QMSNVQNAQRGTANDRGDFWRLRGQRAAKKKDLRKSREDLTAIPVTTRFPAYERVVLREA
GFRRPVVVFGPIADAVNEKLANDLPEEFVIAKTEPKDAGTEKSSGVVRLNTIRQIIEQDH
HALLDVTPKAVDTLNYTQWYPIVVFLNPDSKVGIKTMRNRLVPGSNRSARKLYEQAVKLR
KNYSHLFTATVDLNSANDGWYGSVKDSIRAQQERAVWICEGKLDGSEEELDIHDDRMSYL
SAMSADYLSMDSRLTSDYDDTADEGGAYTDNELDEPMDEPHQPVSAISRSSEPVLPEERP
HPAPIPRMRRSGSREVLRDPSPPPSFVPEPPKVRVQSRGGYDSHSSSTISSDAAGGPKPA
PPPVALKPTLKALSQSSEEHSVKGGEDPANHSFIGKVKAFEKMDHLARAQRMLELQEAEH
ARLEIAQKHPDIYAVPVKLPKPNHNRPQPIGSSSNPVPQSSRPPYSESRGHYDDDKEEYR
RQLADQTRRGYYSNPQKYKDTEM
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtcctccacctgcacaggaaatggatccacacctacaaggccatccgtatc
ctccaggggctcagcccagtcatggaggaaacagtgtgggagcagtacactgtgacgctg
cagagggaccccaagatgggttttggtattgcggtttctgggggccgggacaaccccaac
gaggaaagcggggagatgtccatagtggtgtctgatgtgcttcagggagggcccgccgat
ggcctgctatttgataatgaccgggtggtgcaggtgaacgccactcccatggacggcgtg
ccacactccttcgctgtacagaccctcaggaagtgtggaaaagtagccaaaattacggtc
aagaggcccaggaaggttccggtcaacctgctgaaacgcgctccttcccctgatgaccgc
gtcttcagtaacgactacaacgatgactacgatcaggaccgccgcagtgtgtacagcgaa
cgcagcagtcatcaagaccgcgaccacagccaggagagggggtgttacacagacgctggc
taccagggacggggctttgaccgtgattacggtcgagatgaccgaggcagaagtatggag
agggaccttgatccagacaggcagtacagacgagacgggagcatgggtcgcactctggac
cgtgaacgtagccctgaccgccgctacaaaagcgacctcactcttgaccgtgaccacagc
cccgatcggcgttaccgtagtgaacgggcccttgaccgcgaccccagccccgacaggcgt
ttccgtagtgaacgcactctggaccgcactaacagccccgacctgcggtacagagccggt
cacagtcctgcccgcagccatggtcgcgaccacagctttgagagttaccgtgaacgtgtt
cctagtgaccgcgaccacaggaaagagcagatgaagaggagcgggagcagggagcgtctg
gaccgctcaccctcccccgccgccatgccagtccccatggcccgcccccctcgggagcag
gagcccctggagaaacccctcagtgtgctgctgctgaagaacaggcccaatgaagagtat
ggtctgcgtctgggcagtcagctgttcattaaggagatgacaagcacaggtctggcctgc
agggatggcaacctccaggagggagacatcatactgaagatcaatggtacagtgacagag
aacctgtctctgagcgatgcagggaagctgatcgagaagtctcgaggaaagctgcagctg
gtggtgcagagagacaggagacaggtcctcatcaggattcctcccctggcagacagcgac
tctgagctcgatgatatctcagagatcgagtcttaccgctcctactcgccacaggatgac
cgacgggccccccactcagacctgtcctcccactcctccaatgagaggctcagagacaaa
cccagggaggaacctcccagcaggctggctaaaatgggcgctatgccgacaccgttcgcc
atgccggcgcgaaagccggatagagttgtggaggacacgccccctctgccagcagagagg
gaggaaccccgcccagaaacacccccagcaccggtagtaactgttgccccaaaagtccac
gctgccccaaaggtaccactgaggccaagcatagaggatcaggagatatacgggcccaac
acggtgatggtgcgtttccagaagggagagagcgtggggctgaggctggcgggaggaaac
gatgtgggaatcttcatcgcaggcattcaggaggacagtcctgcagaacaggagggtctt
cacactggggaccagatcatgaaggtgaataacatggacttcaggggcatggtgcgtgag
gatgctgtcctgtacctgctggagattccaaagggagatgatgtcaccatcctggctcag
agcaaacctgatgtctataaggacatcctggcatcgggcaggggggactcgttcttcatc
aggacccattttgagtatgataaagaggttccccagagcctgcccttctttcgaggggag
atcttcaaggtgacagacacactctacgatggcaagctgggcaactggctggccatccgc
actgacaaagacaaccagctgctggagaagggtatcatccccaacaagagcagggcggaa
caaatgtcaaatgtgcagaatgcccagagaggaacagccaatgacagaggagacttctgg
aggttgaggggtcaaagggcggcaaagaagaaggacctccgtaagagcagagaggacctg
actgccattccagtcaccactcgcttccctgcctacgagagggtggtcttacgagaagct
ggcttcaggagaccagtggttgtgttcgggcccattgcagatgcagtcaatgagaaactg
gccaacgacctgcctgaggagtttgtcatagctaagactgagcccaaggatgcaggcact
gagaagtcctccggtgtggtgagactcaataccattcgtcagatcatcgaacaggaccac
catgctctgctggacgtgactcccaaggcagtggacaccctgaactacacccagtggtac
cccattgtggtgttcctaaacccggacagcaaggtgggcatcaagacgatgagaaaccgc
cttgtgcccggctccaatcgcagcgcccgcaaactctacgagcaggcggtcaaactgagg
aagaactattcccacctcttcactgcgaccgttgacctgaattcagccaatgacgggtgg
tacgggagtgtgaaagactctatccgtgcacagcaggagcgggctgtgtggatctgtgag
ggcaagttggacggctcggaggaggaactggatatccatgatgaccgcatgtcgtaccta
tcagcgatgagcgccgactacctgagcatggacagtcgactgaccagcgactatgatgac
acggccgacgagggcggggcttacaccgacaacgagctggacgagccaatggacgagccc
catcagccggtgtcggccatcagccgctcctcagagcccgtactaccagaggagagaccc
catcctgcccccatacctcgtatgaggagatcagggagcagagaggtgctgagagacccc
agcccacccccctccttcgtccctgagccccccaaggtgagggtgcagtctcgcggggga
tatgactcccactccagcagcaccattagcagtgacgcggccggggggcccaagcccgcc
ccgccccccgtggcccttaagcccaccctgaaggccctcagccagtcgtctgaggaacac
agtgtcaaggggggagaggacccggccaaccactcattcattggcaaggtgaaggccttc
gaaaagatggaccacctggccagagcccagaggatgctggagctccaggaggccgagcat
gcacggctggaaatagcccagaagcacccagacatctatgcagtcccagtgaaactacca
aagcccaaccacaaccgcccacagccaataggctccagctccaacccagtgccccagtcc
tccaggccaccgtactctgagagcaggggtcactacgacgacgataaggaagagtaccgc
agacagctggccgaccagaccagacgaggctactacagcaacccccagaaatacaaagac
actgagatgtag
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