KEGG   Coregonus clupeaformis (lake whitefish): 121541962
Entry
121541962         CDS       T08357                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu00052  Galactose metabolism
cclu00510  N-Glycan biosynthesis
cclu00513  Various types of N-glycan biosynthesis
cclu00514  Other types of O-glycan biosynthesis
cclu00515  Mannose type O-glycan biosynthesis
cclu00533  Glycosaminoglycan biosynthesis - keratan sulfate
cclu00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100  Metabolic pathways
Module
cclu_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cclu_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    121541962
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    121541962
   00513 Various types of N-glycan biosynthesis
    121541962
   00515 Mannose type O-glycan biosynthesis
    121541962
   00514 Other types of O-glycan biosynthesis
    121541962
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    121541962
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    121541962
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cclu01003]
    121541962
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121541962
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121541962
Enzymes [BR:cclu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     121541962
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     121541962
    2.4.1.90  N-acetyllactosamine synthase
     121541962
Glycosyltransferases [BR:cclu01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   121541962
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    121541962
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   121541962
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 121541962
NCBI-ProteinID: XP_041707311
LinkDB
Position
3:complement(22292711..22307649)
AA seq 359 aa
MMRDSNVNFSVLHRTCKLVVLLCFLHISVTLIFYMRSLDIPFAFAQNQQAHTAKKHDQTT
SKDTVPDVVETNRFSVDNMPPNVTFTKYLGKCPDTSPLLVGPLRIEFSNPVSLDVVRKEN
PNLQNGGRFKPKDCVALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGIYVINQDG
DEIFNRAKLLNIGYMEALKEYDYGCFVFSDVDLIPMDDRNTYKCFSQPRHLSVSMDKFGF
RLPYNQYFGGVSSMSKEQFLKINGFPNNYWGWGGEDDDIYNRLSSKGMTISRPSGAVGKC
RMIRHNRDGGNEDNPQRFDRIAHTRETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGKK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgatgcgggattcaaacgtgaatttcagtgttctccatagaacttgcaaattggtcgtc
cttctatgttttctccatatttcggtgactttaattttttacatgaggtcgttagatatt
ccatttgcgtttgcacaaaatcagcaagcacacacagcaaaaaagcatgaccaaactaca
tcaaaggacaccgtacctgacgtggttgaaacgaaccgcttttctgtagacaacatgcca
cctaacgttacattcaccaaataccttggaaaatgtcctgacacatcaccactgcttgtg
ggcccactgcgaattgagttctccaacccagtcagcctggatgtggtgaggaaggagaac
ccaaatcttcagaatggggggcgcttcaagcccaaagactgtgtggccctccagaaggtg
gccatcatcatcccttttcgcaaccgcgacgagcatctcaagttctggctgtactacctc
catcccatccttcagcgtcagcagctggactacggcatctacgttatcaaccaggacggt
gatgagatctttaaccgcgccaagctcctcaacattggctacatggaggccctgaaggag
tacgactatggctgctttgtgttcagcgatgtggacctcatccccatggacgaccgcaac
acctacaagtgcttcagccagcccaggcacctgtctgtctccatggataagtttggcttc
aggttgccgtacaaccagtactttggaggcgtgtcatcaatgagcaaggagcagttcctc
aagatcaacggcttccccaacaactactggggctggggaggggaggatgacgacatttac
aacaggctgagctccaaggggatgaccatctcacggcccagcggcgccgtggggaaatgc
aggatgatccgccacaaccgggacggtgggaacgaagacaaccctcagaggttcgaccgc
atcgcccacaccagggagacgatgaacaaagacggcatcaaaaccctgtcgtataaagtg
gtcaaagtggagaaggatcaattatataccaaaatcactgtggacgtggggaaaaaatga

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