Coregonus clupeaformis (lake whitefish): 121542363
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Entry
121542363 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121542363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121542363
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121542363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
EGF_Sp38_C
Motif
Other DBs
NCBI-GeneID:
121542363
NCBI-ProteinID:
XP_041707699
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MSAHIMRPQPAMQLYVLFTISFSWAFHEVPPPKYQHHDPLTSELLLCDQCPPGTAILTHC
TADTPTACSPCPDRSFSEHWHWGDSCQYCTTVCKERQLVRQECNSTHDQLCECVPGYHLV
VEFCIKHTPCQPGYGVSALGTPEVDTVCEACSQGLFSSRVSASEPCVSHRNCSELGLKTL
RPGTTTQDTLCENEAKGSVLECSHPHTQCHTDVSLCEEAIFQSLASLRLSSIPLERLLES
LPGKRVDRKSLERLKKVCSPHQQILLLLRLWREQNKDQVKLYGVIQGVNNCERKVSRCAG
LKNLTMGDLLTVMDSLPGVRADEEDVRAVVSSCRSQQYLLQLLHLWKNQNKDLDINKGLA
HSLSRLRQQGAPRPLLRSIKKINRIISTSSVHKMYEKMFLNMIEDGTCFKTEPYNQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcacattatgagaccacagccagcaatgcaattatatgtgctcttcaccatt
tccttctcctgggcgttccacgaggtcccaccgcccaagtaccagcaccacgaccccttg
acctctgaactccttctgtgtgaccagtgtccgcccggcacggccatcctgacccactgt
accgccgacacccccaccgcctgctcgccgtgccccgaccgctccttctcagaacactgg
cactggggcgacagctgccagtactgcacgacggtctgcaaggagaggcagctggtgagg
caggagtgtaacagcacccacgaccagctgtgtgagtgtgtaccaggctaccacctggtg
gtggagttctgcatcaaacacaccccctgtcaacctggctacggcgtttcggctctaggt
acaccagaggttgacacagtgtgtgaggcgtgttcgcagggcctgttctccagccgggtg
tctgccagcgagccgtgtgtgtcccacaggaactgctctgagctgggcttgaagaccctc
cgaccgggcaccaccacccaggacacactgtgtgagaacgaggctaaaggatctgtcctg
gagtgctcccatccccacacgcagtgtcacactgacgtgtcgctgtgtgaggaggccatc
ttccagtctctggcgtccctccgtctgtcctccatccccctggagcgtctcctggagagc
ctgcctgggaagagggttgacaggaagagtctggagaggctgaaaaaggtctgctccccc
catcagcagatactactcctgttgagactctggagagaacagaacaaagatcaggttaaa
ctctacggcgtcattcaaggtgtgaacaactgtgagcggaaggtgtccagatgtgcgggt
ttgaagaacctgaccatgggtgacctcctgacggtgatggacagtctcccaggggtccgg
gctgacgaggaggacgtcagggccgtggtctcctcatgccgctcccagcagtacctcctg
cagctcctacacctttggaagaaccagaacaaggacctggacatcaacaagggtctggcc
cacagcctgagcaggctccggcagcagggggcaccacgcccgctcctcaggagcatcaag
aagatcaaccggatcatctccacctcctccgtacacaagatgtacgagaagatgttcctc
aacatgatcgaggacgggacctgcttcaagaccgaaccctacaaccaatag
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