Coregonus clupeaformis (lake whitefish): 121542859
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Entry
121542859 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04270
Vascular smooth muscle contraction
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121542859
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121542859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121542859
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121542859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PGDH_C
Motif
Other DBs
NCBI-GeneID:
121542859
NCBI-ProteinID:
XP_045074138
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
KQARGNCALEFVLPRINVFFQRHTPTFEQQTILDFVSLFLLYFERGAFGPQWFNPAMSII
GAEDEDFENDLEPMVDDHSSHFTSIELVKGRPTHLLVFLQHVILQFDCSSLLCYLHADLF
KNLSTKETKKHFVDFYNSFLDKGAILRVQVPHNVSFELDRTRPDLLSEEQQKKFVQDVQL
AQVPEVLRQLEDFRQKRMMGMTPNAAELMEVESHYPTDRIPMEMKEKAVAETLLDKMSEI
HPSIVADEEKCSSIFAAVAFYMKHLGVKSRVADSKKSRGFFRRPLGKSKKSEESTKSKQK
GGFPNILSAAGGWIAGSTEVKLPKVEAEVDKEKVNQERKASSGLAPSRGSSAPDAAPPAL
NRKSVSTGSASHQGSEVSEGSGVHISVTSSPDFSHSEIGLFNSRSDPQLVAEGGEVSPAG
LPGGLAIWEPPSPNELPQRKTWTKTDARQGFGRLDHFLVVPVLLTPPVSLLPPYTTFLLV
FSRPLALLSLSSLPSLDVLSSSLPTSLPRRVGRSESARVDRHSSRRRGSSRAKQSRSRSD
VDLQAAAATAAHSSPTSPHPSVDEGVLLLEGALPGLSLSGPTPQQEEQDPRLLELEQDPP
NWREHTPPDTLKDLSKKETKRQEVINELFATEHAHVRMLSVLQTVFWKPLEREELMTTTE
LATIFPSLDEIIDMHYAFYEHLKKLRQHNFIVKAIGTTLLNRFGGTEGEWFQKLTSRFCS
HQTWALEQLKIRQKKDPRFNAFILEAESRPQCRRLQLKDIIPTEMQRLTKYPLLLENIAK
CTEDTLEKESIQQSAECCRKILNHVNEEVKQMENLLTLKDYQRRLDTSGLKPSFLLYLEY
RNLDLAQRKMIYEGPLTWRVTKEKTLGALSTLLTLVC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
aaacaggcaaggggaaattgtgcacttgaatttgtacttccgcgtataaatgtttttttc
cagcgacatacgccaactttcgaacagcaaaccatattagactttgtcagtctttttttg
ctgtattttgagcggggagcgtttgggcctcagtggtttaacccagccatgagcatcatc
ggagctgaggatgaagactttgagaatgatctggaacctatggtggatgaccacagcagt
cacttcaccagtatagagctagtgaagggcaggccaacccacctgctggtcttccttcag
cacgtcatcctgcagttcgactgctcctccctgttgtgttacctccatgctgacctcttc
aagaacctcagtaccaaagagaccaagaagcattttgtggatttctacaacagcttcctg
gacaagggcgctattctcagagtgcaagtccctcacaatgtatcgtttgagttggaccgt
accagaccagacctgctcagcgaggagcagcagaagaagtttgtccaggatgtccagttg
gctcaagtcccagaggtgctgcgacagctggaagacttcaggcagaagaggatgatgggt
atgacccctaacgcggcagagctgatggaggtggagtctcactaccccaccgatcgtatc
cccatggagatgaaggagaaggccgtggcagagaccctgctggacaagatgtctgagatc
catccctccatcgttgcagatgaggagaaatgttcgtccatctttgcagcagtggccttc
tacatgaagcacctaggagtgaagtccagagtagctgacagtaagaagtccagaggcttc
ttcaggagaccccttgggaagagtaagaagagtgaggagtccactaaatccaaacagaag
gggggttttcccaacatcctcagcgccgctggtggctggattgctggcagcactgaggtc
aaacttcctaaagtggaggctgaagtggataaagagaaggtgaatcaggagcgtaaggct
tccagcggcctcgccccctctcgaggctcctccgcccctgatgccgccccgccagcatta
aacaggaagtctgtttccacaggatccgcctcccatcaggggtcggaggtcagcgagggt
tcaggggtccacatcagtgtgacctccagcccagacttctcccacagcgagataggtctg
ttcaacagccgttcggacccccagttggtggcggaggggggcgaggtgtcccccgcgggg
ctgccaggggggctggctatatgggagcccccctcacccaatgaactcccccagaggaaa
acctggacaaagacagacgcaagacaagggtttggtcgtctggaccatttccttgttgtt
cctgtactcctcactccacctgtctctctacttcctccttataccaccttcctccttgta
ttttcccgcccactggctctcctctcgctctcctcccttccttccctcgatgtactctcc
tcctccctccctacctccctccccaggcgtgtgggacgcagtgagagtgctcgtgtggac
agacattcctcccgtcgccgtggctcctcccgggccaaacagtcgcgttcccgtagcgat
gtggacctgcaagccgccgccgccacagcagcacactcctccccgacctctccccacccc
tctgttgatgaaggggtgttactcctcgagggtgcgctcccaggtctttccctctctggc
cccaccccccagcaggaggaacaggaccctcgccttctggagctggagcaggacccgccc
aactggagagaacacacccccccagacaccctcaaagacctcagcaagaaggagaccaag
agacaggaggtcatcaatgagttgtttgcgacggagcatgcccacgtgcgcatgctgagt
gttctgcagacagtgttctggaagcctctggagagagaggaactcatgaccaccacagag
ctggccaccatcttccccagcctggacgagatcatagacatgcactatgctttctatgag
cacctgaagaagctgcgtcagcacaatttcatcgtcaaggccatcggaaccacgttactc
aacaggtttggagggacggagggtgagtggtttcagaagctgacgtctaggttctgtagt
caccagacgtgggccctggaacagctgaagatcagacagaagaaagacccccgtttcaac
gccttcatactggaggcagagagtaggcctcagtgtcgtaggctgcagctgaaggacatc
atccccactgagatgcagaggctcaccaaataccccctactgctggaaaacatcgccaag
tgcacagaggacaccttggagaaggagagtatccagcagagtgcagagtgctgtaggaag
atcctcaaccacgtcaacgaggaggtcaaacagatggagaatctgctgacactgaaagac
taccagcgcaggctggacacctcaggactgaagcccagtttcctgctgtacctggaatac
aggaatcttgacctggcccagagaaagatgatctatgaggggcctctgacctggagagtg
accaaggagaaaactttaggtgctctatcaactctactaacattagtttgttag
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