Coregonus clupeaformis (lake whitefish): 121542962
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Entry
121542962 CDS
T08357
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6 isoform X1
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121542962
09144 Cellular community - eukaryotes
04520 Adherens junction
121542962
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121542962
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121542962
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
121542962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
PTP-SAK
DSPc
Tc-R-P
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
121542962
NCBI-ProteinID:
XP_041708553
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MKRATKRKEGARVSQNDRERKREKRGGTEEEVKVKMVRWFHRDISGVEAESVLKSRGVHG
SFLARPSRKNQGDFSLSVRVGELVTHIRIQNTGDFYDLYGGEKFATLSELVEYYTAENGI
LQDKDGTIIELKYPLNCSDPTTERWYHGHLSGPNAEKLLWERDEPGTFLVRESLSKPGDF
VLSVLTEEKSKASSGGRRVSHIKIMCQNDRYTVGGKEMFDTLADLVEHYKRKGIEEMSGT
WVHLKQPYFSTRVNAADIDSRVRLLDQTAERENEGDKKSKAGFWEEFDALQKQESKVKKS
REEGMRPENKSKNRYKNILPFDETRVILLSGDPNIIGSDYINGNYLTNKLQEPGDQKVYI
ACQGCLATTVNDFWQMVWQENTRVIVMTTREVEKGRNKCVPYWPEMQDFKDVGPYVVTNV
SERDATDYKIRIMEISPLDQSDSVRTIWHYQYLSWPDHGVPEEPGGVLSFLTQVNAKQDE
FLDAGPMIIHCSAGIGRTGTIVVIDMIIETINTKGQDCDIDIQKSIQMVRDQRSGMVQTE
AQYKFIYLAVSQYIEASKVSMMAYNKGAETEYGNLQFKHKPASRQVSKNKEQELYENQAK
GKKDVKKQKSEEKKSRSVRKR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagccacaaaaaggaaggaaggagcgagagtgtcacagaacgacagagagaga
aaacgagaaaagaggggagggacggaggaagaagtgaaggtgaaaatggttcggtggttc
cacagggatatctctggcgtggaggctgagtctgttttgaagagcagaggcgtccatggc
agcttcctggcccgacccagcaggaagaaccagggagacttctctctctctgtcagggtg
ggtgagctggtgacccacatccgtatccaaaacacaggggacttctacgacctgtatgga
ggggagaagtttgccacgctgtccgagctggtggagtactacactgcagagaacgggatc
ctgcaggacaaagatggcaccatcatcgagctcaaataccccctcaactgctccgacccc
accaccgagaggtggtatcacggacacctgtcaggccccaacgcagagaagttgctatgg
gaacgggatgagccaggcaccttcctggtgcgtgagtctctgtccaaacctggagacttt
gttctgtctgttctgactgaggagaagagcaaggcatccagcggagggaggagggtctca
cacatcaagatcatgtgccagaatgaccggtacacggtgggaggcaaggagatgtttgac
accctggctgacctggtggagcactacaaacgcaaaggcatcgaggagatgtctggaacc
tgggtgcacctcaaacagccctacttctccaccagagtgaatgcagcagacattgacagc
agagtgaggctgctggaccagacggcggagagagagaacgagggagacaagaagagcaaa
gcaggattctgggaggagtttgatgcccttcaaaagcaggagtcgaaggtgaagaaaagc
agagaagaagggatgagaccagaaaacaaaagcaaaaaccgatataagaatatccttccc
tttgatgagaccagggtcattctgttatctggagaccccaatatcattggctcagattac
atcaatggcaattatctgacaaataagctgcaggagcctggtgaccagaaggtgtacatt
gcctgtcagggctgccttgcaacaactgtcaacgatttctggcagatggtgtggcaggag
aacacaagggtcattgtcatgacaaccagggaggtcgagaagggacggaataaatgtgtg
ccatactggccagaaatgcaggacttcaaagacgtggggccgtatgtggtcaccaatgtg
tctgagagagatgccactgactacaagatcaggataatggagatctcccctctggaccag
tcggactcggtccgtactatctggcactaccagtacctgagctggcctgaccatggagtt
cccgaggagccaggaggggtgctcagcttcctcactcaggtcaacgcaaaacaggacgag
ttcctcgacgccgggcctatgatcatccactgcagtgctggaataggccgaactggcacc
attgtggtgatcgacatgatcatcgagaccatcaacactaaaggtcaggactgtgacata
gacatccagaagagcatccagatggtgcgagaccagcggtcaggcatggtgcagactgaa
gcccagtacaagttcatctacctggccgtctctcagtacatagaggcctccaaggtctcc
atgatggcctacaacaagggagctgagacagagtatgggaatttgcagttcaaacacaag
cctgccagccgccaggtctccaaaaacaaggaacaggaattgtatgaaaaccaagccaaa
ggaaagaaagacgtgaagaagcagaaatcagaggagaagaagagtcgctcagtgagaaaa
agataa
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