Coregonus clupeaformis (lake whitefish): 121542980
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Entry
121542980 CDS
T08357
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04150
mTOR signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu04920
Adipocytokine signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121542980 (tnfrsf1a)
04150 mTOR signaling pathway
121542980 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121542980 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121542980 (tnfrsf1a)
04217 Necroptosis
121542980 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121542980 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121542980 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
121542980 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121542980 (tnfrsf1a)
04090 CD molecules [BR:
cclu04090
]
121542980 (tnfrsf1a)
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121542980 (tnfrsf1a)
CD molecules [BR:
cclu04090
]
Proteins
121542980 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
121542980
NCBI-ProteinID:
XP_041708582
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MDILRGKWKEKCILNVCTLLVLCWSVDPSLSAPPPPPDRTQVESNHGNQESLCHEGSHYR
INGICCGKCHEGFKLKEHCTKEGENSQCVPCEEGKTFLDRSNYVINCRSCTRCVDNETEV
SPCKKSKNKECRCNEGFYKKRIDSVTRECLSCKQCGPGERKTQQCTPESDTVCECKDFYF
RDKKKNRICLQCKDCISADCQQECASSTHPNPNAKPQDTGWGVWSTYLLAVFGCVCVVLL
VVVVIMGVLVVRWKLKGSSSFPSAEITSQGSEKSTRMLIQEDPENILNQSIPSCSPVCEC
EQEPLSKLPDCVPKEIKISELIYSVLDQVSPRRVKELVRSLGVSDIVIERAENDHLRDTK
EAQYQMLSVWAKGRAQGGGGVLARPLLHDLLDKLRDMDLGGTAEELETKYGDQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacatcttgagagggaaatggaaggaaaaatgcattctgaacgtttgcactctgctc
gtattgtgctggtcagtagacccctccctctcggcaccaccaccacctcctgataggacc
caggttgagagtaaccatggaaaccaggagtcgctatgccatgaggggagtcattaccgc
attaacgggatatgctgtggaaagtgccatgaagggtttaagctgaaggagcactgcact
aaagagggcgagaatagccaatgtgtcccctgtgaagagggcaagacgtttctagacagg
agtaactacgtcatcaactgccgcagttgtacacgctgtgttgacaatgagacagaggta
tcaccatgcaagaagagtaagaacaaagagtgtcgctgcaacgaaggcttctacaaaaag
agaatagactcagtaacacgggagtgcctcagttgcaagcaatgtggacctggagagaga
aaaacacagcaatgtactccagagagcgacacagtgtgtgaatgtaaggacttctacttc
cgagacaagaaaaagaacaggatctgtcttcaatgcaaagattgtatatcagctgactgc
cagcaggagtgtgcttcaagcacacatcccaatcccaatgcaaaaccccaagacactgga
tggggtgtttggtctacctacctgttggctgtgtttggctgtgtttgtgtggtgctactg
gtggtggtggttatcatgggcgtactagtggtccgatggaaactgaaggggtcgagctcc
ttcccctctgctgagatcacctctcagggctctgagaagtctactcggatgctgatccaa
gaggacccagagaacattctcaaccagagtatcccttcatgtagcccagtgtgtgagtgt
gaacaggagcccctcagcaagctaccagactgtgtccccaaggagatcaagatctctgag
ttgatctactcggtgttggaccaagtctccccgcgtcgtgtgaaggagctggtgcgttcg
ctgggtgtgagtgacatagtgatagagcgggctgagaatgaccacctccgtgacactaag
gaagcccagtaccagatgctgagtgtctgggctaagggaagggcgcagggagggggaggg
gtgctagcacgccctctactgcacgacctgctggataagctgagagacatggacctggga
gggactgcagaggagctggagaccaagtatggggatcagtag
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