Coregonus clupeaformis (lake whitefish): 121543120
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Entry
121543120 CDS
T08357
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04620
Toll-like receptor signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121543120
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121543120
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121543120
09171 Infectious disease: bacterial
05132 Salmonella infection
121543120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121543120
04054 Pattern recognition receptors [BR:
cclu04054
]
121543120
04090 CD molecules [BR:
cclu04090
]
121543120
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121543120
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Toll-like receptors
121543120
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121543120
Pattern recognition receptors [BR:
cclu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121543120
CD molecules [BR:
cclu04090
]
Proteins
121543120
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Hyaluronan
Cell surface receptors
121543120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_9
LRR_NXF1-5
ThsB_TIR
LRR_EndoS
RE_XcyI
Motif
Other DBs
NCBI-GeneID:
121543120
NCBI-ProteinID:
XP_041708759
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MYMHTMILLDIVWFSLPLLVVLASPTPASNDERGPCQIYNSGRSANCLGQRLDHVPWKHL
PSTLESIDLSYNELNAIRVNYFSRLPHLRVLELQFNNISVIEDRAFHNNPLLEHLNIFNN
SLEEIPANALQDLFNLRELLMSNNLYTQATLAADVFSRLTHLKALSMGGPLVKGLRKGDF
QALRNIQLQEFAIKTSSNISYYEPGSLKVIQTWRMGFDMAIDQKPNFLPLILRDLANKTF
SLIQFRNLFEFMYYMGDEDIFRGLQDIKVDSLIFHRGKFNENLMRMALFNLQVTPLKHLT
LQYIDFARSPNFVDNGLGSSIKNLALSRLHLWHISNPDILRFDWRFTWFNKVQLLSIQNV
NFNSVPCDAWLNMEGMEVLDISNNRLQDNILFNQRCNYRGTMPALRSFNVSTNQLTSLQD
LASLTKEFKQLKVMDVSHNMLGSAEKSHNCNWMQNITQVIAHHNRFESGALQCLPTTVQF
LDLSYCDLDQLDMVYFQQTTSLKELLLNGNKIKFIPSGWRSHSLQSLALDGNSFGLISMG
SFQDMPQLSRLTAGNNPYHCTCDLHAFIQDTISKGNVNITDWPENYKCYHPEALLNTAVA
VFFPGHVACDVRLVIIISVATTAAVVLVLMLICYIFNVPWYTKATYQILRAKYRAHQEGA
SGKSQIYAYHAFISYSHPDADWVRDQLLPCLENSKPPYRLCIHERDFTPGKWIIDNIIEN
IESSEKIIFVLSRHFVNSDWCNYELYFAQQRAIGKTFSDVILVVKEPIDPESLPSKYCKL
KKMLNTKTYLEWPQQAKQQTFFWAQLKNVLGKPTLTREQALSGRSSSVSSVGAVPMIELP
LEDGKLAISMPKLDRKAELHQVVGQRPIPVAVA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgcacacaatgattctacttgatattgtgtggtttagtctgccacttcttgtg
gtccttgcctcaccaacccctgcttcgaatgatgagagaggcccctgtcaaatctacaac
tctggtcgctccgcaaactgccttggtcagcgactggatcatgttccatggaagcacctc
ccttccacgcttgaaagtatagatctctcctacaatgaacttaatgccattcgtgttaat
tacttttctcgcctacctcatcttcgtgtccttgagctgcagttcaacaacatctctgtg
attgaggaccgtgccttccacaacaaccccctcctggagcatcttaacatctttaacaac
tccctagaggaaatccctgccaacgccttgcaggacctctttaatctaagggaactcctt
atgtcgaataacctttacacccaggccacattggcagctgacgttttctccagattgacc
cacctcaaggccctgtccatgggcggccccttggtcaagggtctaaggaaaggggacttc
caggcattgaggaacattcagttacaggagtttgccattaaaacttcatccaatatcagt
tactatgaaccgggtagtctgaaggtaatccagacatggagaatgggttttgacatggcc
atagatcagaagccaaatttcctacctttgattcttcgagacttggccaacaagactttc
agtctcatccaattcaggaacctctttgagttcatgtattacatgggagatgaggatatt
ttcagaggcttgcaagacatcaaagtagattcgctcatctttcaccgtggaaaattcaat
gagaaccttatgaggatggctctgtttaatctacaggtcaccccccttaaacatctgaca
cttcaatacattgactttgctcgctcgcccaactttgtggataatggcttgggctccagt
atcaaaaaccttgcactgagtagactccatctgtggcatatcagtaatccagacattttg
cgtttcgactggcgcttcacatggttcaacaaagtccaactgctgtccattcagaatgtg
aacttcaactctgtgccttgcgacgcctggcttaatatggaaggcatggaggttttggac
atctcaaacaaccgcctgcaggacaacatcctcttcaaccagagatgcaactacaggggc
accatgccggctcttcgatccttcaatgtcagcaccaaccaactgaccagccttcaggac
ttagcctccctgaccaaggagttcaaacagttgaaggtcatggatgttagccacaacatg
ctgggctctgctgagaagagtcacaactgtaactggatgcagaacatcacccaggtgatc
gctcaccacaaccgattcgaaagtggtgccctccagtgtctgcccaccacagtacaattc
ctggacctctcgtactgtgacctggaccagctggacatggtatacttccaacaaaccacc
agcctcaaggagctcctgctcaatgggaacaagatcaagttcatcccttctggttggaga
agtcactccttgcagtcactggctctggatgggaactcctttgggctcatcagcatgggc
tccttccaggacatgccccagctgtctcgactgacggcagggaacaacccataccactgc
acctgcgacctccacgccttcatccaggacacaatttcaaaggggaatgtcaacatcact
gactggccagagaactacaagtgttaccatccagaggccttgctcaataccgctgtggca
gttttcttcccgggtcacgttgcctgcgatgtcagactggtcatcatcatctctgtggct
actactgcagctgtggttttagtgttgatgcttatatgctacatattcaatgttccctgg
tacaccaaagccacatatcagatcctcagagccaaatacagggctcatcaggaaggagcc
tctggaaaatcacagatctatgcttaccacgccttcatctcctacagccacccagatgca
gactgggtcagggaccagttgttgccctgcttggagaacagcaagcccccctaccgactc
tgtatccatgagagagacttcacgccaggaaagtggatcattgacaacatcattgaaaat
attgagagcagcgaaaagatcatatttgtgttgtcacgccactttgtgaacagcgattgg
tgcaactacgagctctactttgcccagcaacgagccatcggcaagaccttcagcgatgtt
attctggtggttaaagagcccatcgaccctgaatctctgcccagcaagtattgtaagctc
aagaagatgctgaacaccaaaacgtacctagagtggccccagcaagccaagcaacagacc
ttcttctgggctcaacttaagaatgtcctgggcaagcccacactgactagagagcaggct
cttagtggtaggagcagcagtgtatcctcagtgggcgctgtgcctatgatagagctccct
ctagaggatgggaagctggcgatatctatgccaaagttagacagaaaagcagagctccac
caagtggttgggcaaagaccaatccctgtagctgtggcatga
DBGET
integrated database retrieval system
