KEGG   Coregonus clupeaformis (lake whitefish): 121543888
Entry
121543888         CDS       T08357                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-R alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145  Phagosome
cclu04514  Cell adhesion molecules
cclu04672  Intestinal immune network for IgA production
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121543888
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121543888
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    121543888
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121543888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121543888
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121543888
  Exosomal proteins of epithelial cells
   121543888
  Exosomal proteins of breast milk
   121543888
SSDB
Motif
Pfam: C1-set
Other DBs
NCBI-GeneID: 121543888
NCBI-ProteinID: XP_041709958
LinkDB
Position
17:2107247..2107810
AA seq 142 aa
MFWFLFAPQSTIYPRDEEELGVENTLIYSVNHFFPSSVKVNWTNNSLEVTEGASLSWCNL
TKDGTFHQFSTVSFTPQKGDFYACTVAHTALKDPKTRFWEPEFSEVSASSTDPAVFCGVG
LALGLLGVATGTFLIIKGNQCN
NT seq 429 nt   +upstreamnt  +downstreamnt
atgttctggtttctatttgccccccagagcaccatctaccccagggatgaggaggagctg
ggggtggagaacacgctcatctactctgtgaatcatttctttccctcgtctgtcaaagtc
aactggaccaataatagcctggaggtgactgagggagcgtctctcagttggtgcaatctt
actaaagatggaacgttccaccagttctccaccgtgagtttcaccccacagaagggtgac
ttctacgcctgcactgtggcgcacacggccctgaaggaccccaaaactaggttctgggag
cctgagttcagtgaggtaagtgcgtccagtactgatcctgctgtattctgtggagtgggc
ctggctctgggactgctgggggtggctaccggaacattcctcatcatcaaaggaaaccag
tgcaattga

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