KEGG   Coregonus clupeaformis (lake whitefish): 121545388
Entry
121545388         CDS       T08357                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121545388 (ift122)
Cilium and associated proteins [BR:cclu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   121545388 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Beta-prop_EML_2 Zn_ribbon_IFT122 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 TPR_IFT80_172 Beta-prop_CAF1B_HIR1 TPR_IF140-IFT172 NBCH_WD40 TPR_GEMI5 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th eIF2A TPR_7 TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_IFT140_2nd Beta-prop_SPT8 TTC7_N
Other DBs
NCBI-GeneID: 121545388
NCBI-ProteinID: XP_041711797
LinkDB
Position
30:33518026..33555319
AA seq 1286 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGSQLIVAAGNRVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGG
SSSPIWSIAWNPSKDWWKWMPFCEGEDDEAVDVDSSMPEPLCLLIDAAYSQSCSSRVEVL
GLGRQLERERQAGRGAETERSGGEEGEPLLQGAFSDPDHFSQLRDEHSDILAVADWGQKL
SFYQLSGKQIGKDRTLTYDPCCVCYFSKGEYIVMGGSDKQASLYTKDGVRLGTIGEQSSW
VWTCRVKPDSNYVVLGCQDGTIAFFQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKV
RIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDDSSDMHYRIKEKICRRFECNLLVVCS
QHIILCQEKRLQCLSFTSIKEKEWLMESLIRYIKVIGGSPGREGLLVGLKNGAILKIFVD
NPFAITLLKQSTSVRCLDMSTSRSKLAVVDEHNTCLVYDIHTKELLFQEPNANSVAWNTQ
CEDMLCFSGSGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMSAVEVPQSAPMYQ
YLERRMFKEAYQIACLGVTDSDWRDLATEALEGLDFDTAKKAFIRVRDLRYLELINSIEE
RKKRGESDSELFLADVYAYQGKFHEAARLYKRTGLDSRALSMYTDLRMFEYAKEFVGAAD
PKNTRMLMSKQADWAKNSKEPRAAAQMYLTAGEHLKAIDIIGEHGWVDMLIDIARKLDKA
EREPLAKCAAYFQKLKHHGYASEIYSKMGDLQALVHLHVEARHWDEAFSLVEKHAQFKDD
VYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLEQLTHNAVVESRFNDAAYYYWMLSM
QCLDIARENEERKEEMLKKFKRFQHLAELYHVYHSIQRYTVRCSPQLKDEPFSSHMPETL
FNISRYLLHNLTKDVPLGISKVNTLYALAKQSRTLGAFKLARHAYEKLQDLHVPSRFQES
MDLGSLTVRSKPYHDNEDLIPMCYRCSTNNPLLSSQGSVCINCKQPFIYSASSYEVLPLV
QFYLDEGIGDEEAVSLIDLEVPCIDRKAARWQEMSSGESQSLKLDDGTEDTEEDPFMAKL
SFEQGGSDFVPVVVSRSVLRSMSRRDVLIKRWPKPLQWEYYRSLLPDVSITMCPSCFQMF
HSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgagggcagttcctacgtggatagacaaagtacatgatcgcgacaaagttgaacaatgt
atatacgaccttgccttcaaaccagatggcagccagcttattgtggcagctgggaatcgt
gttttggtgtatgacacatcagatggaactctaattcagcctctgaaaggacacaaggac
acagtgtactgtgtcgcctacgccaaagatgggaaacggtttgcctcagggtctgctgac
aaaagcatcatcatctggacatctaaactggagggtattttgaaatatacacataatgac
tccatccagtgtgttgcctacaacccagtcacccaccagctggcctcctgctcctctggg
gactttggtctgtggtccccagaacagaaatctgtatccaagcacaaagtcagcagcaag
ataacatgttgtgggtggaccaacgacggtcagtacctggccctgggcatgatgaacggg
gtggtgagcatcaggaataagaacggagaggagaaggtgaagatagagcgaccaggagga
tcctcctctcctatctggtccatcgcatggaacccctccaaggactggtggaagtggatg
cccttctgtgagggagaggacgacgaggcggtggatgtggacagcagcatgccagagccc
ctgtgcctgctcattgatgccgcctacagccagagctgcagtagcagggtagaggtcctg
gggctgggcaggcagctggagagagagaggcaggcaggaagaggagcagagacagaaagg
tctggaggagaggagggagagcccctgctgcagggagcgttctctgacccagaccacttc
agccagctcagggatgagcacagtgacatcctggctgtggcagactgggggcagaagctg
tccttctatcagctcagtggaaaacagattgggaaggacagaactctgacctatgacccc
tgctgcgtctgctacttctccaagggggagtacattgtgatgggcggatcagacaagcag
gcctccctctacaccaaagatggggtgcggctcggcaccatcggggagcagagctcctgg
gtgtggacctgtagagtcaaacctgactccaactatgtggtgttgggctgccaggatggg
accatagccttcttccagctcatcttcagcacggtgcacggcctgtacaaggaccgctac
gcctacagagacagcatgaccgatgtcatcgtccagcacctcatcactgaacagaaagtg
aggatcaagtgcagagagcttgtgaagaagatcgctatctacaggaaccgcctggccatc
cagctgcctgagaagatcctcatctacgagctgtactctgacgactcctcggacatgcac
taccgcatcaaggagaagatctgcagaaggtttgagtgcaacctgctcgtggtctgctcc
cagcacatcatcctgtgtcaggagaagaggctgcagtgtctgtccttcaccagtatcaag
gagaaggagtggcttatggagtctctgattcgctacatcaaagtgattggtggctcaccg
ggcagagagggtctactggtggggctgaagaatggagctatcctgaagatctttgttgac
aacccatttgccatcactctgctgaagcagtctacgtctgtgcgttgtttggacatgagt
acatcccgcagcaagctggccgtggtggacgaacacaacacctgcctggtttatgacatc
cacaccaaggagctgctcttccaggagcccaatgctaacagcgtagcctggaacacccag
tgtgaggacatgctgtgtttctcaggcagcggctacctcaacatcaaggccagtaacttc
ccagtgcatcagcagaagctgcagggcttcgtggtgggttacaacggctccaagatcttc
tgcctgcacgtgtactccatgtccgccgtagaggtgcctcagtcggctccgatgtaccag
tatctggagaggaggatgttcaaggaggcctatcagattgcctgcctgggtgtgactgac
agtgactggagggatctggccacggaagccctagaggggctcgactttgacaccgctaag
aaggccttcatcagagtacgagacctgcgctacctggagctcatcaacagcattgaggag
aggaagaagagaggtgagagcgacagtgagctgttcctagcggatgtctatgcctaccag
gggaaattccacgaggctgccaggctctacaagaggactggcttggactccagagctctc
agcatgtatactgacttgcgcatgtttgagtacgctaaggagtttgtgggcgcggcagac
cctaagaacactcgcatgctgatgtccaagcaggccgactgggctaagaacagcaaggag
ccgcgggccgctgctcagatgtacttgactgcaggagaacacctcaaggccatcgacatc
ataggagaacacggctgggtcgacatgctgattgacatagcccgtaagctggataaggcg
gagcgcgagcccctggctaagtgtgcggcctacttccagaagctgaagcaccatggctat
gcctctgagatctactccaagatgggagacctgcaggccctggtgcatctgcacgtggag
gcacgacactgggacgaggccttctctctggtggagaaacatgcccagtttaaagatgac
gtctatgtgccctacgctcagtggctggctgagaacgaccgctttgaggaggcacagaaa
gcgttccacaaggcgggccgacagagtgaggctgtgaaggtgttggaacagcttacccac
aatgccgtggtggagagcaggttcaatgacgcagcatattattactggatgctctctatg
cagtgtctggacatcgctagggaaaacgaggagaggaaggaggagatgctgaagaagttc
aagcgtttccagcacctggctgagctctaccatgtttaccactcaatacagcgttacaca
gtaagatgctcaccacagctgaaggatgaaccctttagctcccatatgcctgagacgctc
tttaacatctccaggtacctcctgcacaacctcaccaaggacgtaccactgggcatctcc
aaagtgaacactctttatgcgttggccaagcagagcagaaccctgggagcgtttaaacta
gccagacatgcctatgagaagctccaggacctccacgttccctctcgcttccaggagtcc
atggacctgggcagccttaccgtccgctccaaaccataccatgacaatgaggacctgatc
cccatgtgttaccgctgctccaccaacaaccccctgctgagcagccagggcagtgtgtgt
atcaactgcaaacagcccttcatctattcagcatcttcatacgaggtccttcctctggtg
cagttctacctggacgagggtatcggtgatgaggaggctgtgtctcttattgacctggag
gtcccttgcatcgacaggaaggctgctcgctggcaggagatgagcagtggtgagtcccag
tctctgaagctggatgacggcacagaagataccgaggaggaccccttcatggccaaactc
agctttgagcaggggggctctgactttgtcccggtggtggtgagtcgctccgtgctgagg
tctatgagcaggagggatgtcctgatcaagcgctggcccaaacccctgcagtgggagtac
taccgctctttactgcctgatgtcagcatcaccatgtgcccttcctgcttccagatgttc
cacagtgaagactatgagctgcttgtgcttcagcacaactgctgtccctactgccgacgg
cccatcgatgaacccaactga

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