Coregonus clupeaformis (lake whitefish): 121545593
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Entry
121545593 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04144
Endocytosis
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121545593
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121545593
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121545593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121545593
04121 Ubiquitin system [BR:
cclu04121
]
121545593
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121545593
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121545593
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121545593
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
121545593
NCBI-ProteinID:
XP_045065474
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All DBs
Position
30:30044909..30064297
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AA seq
886 aa
AA seq
DB search
MASSVAKPGPGNGYPMKAQLQIMVLSAKLKENRKNWFGPSPYVEVAVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLIFRVWSHQTLKSDIMLGMATLEVSETLKANDMKISEVVQTL
QLSADRDQTDVVGDLSVCLDGMQVDPEMFASAAEANTQSTSNGESQQNGDDVRRSRDGSP
SLDGLEHRASPNGRVVTVNGTGSCKGSPSLSAGGSRGNPLRPPRPSRPPPPTPRRPTSSP
AASSNGSIPTEESDGPSIETPVCTPAVPAPDPNAPPPTHDQSQAIAASQADSVTPGPPRA
PAVAAGPLPPGWEQRVDQNGRLYFVDHVEKRTAWERPEPLPSGWERRVDPMGRVYFVDHI
TRTTTWQRPTMETVRNYEQWQHQRNQLQGAMQQFNQRFIFGVNGLQDQVPATENKQFDPL
GPLPHGWEKRTDSNGRVYFVQHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFV
DHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTL
FEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGK
DNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKPWALKDL
ESIDPEFYNSLIWIKENDIEECGLEMYFSVDKEILGEITTHELKPDGGEVLVTEENKEEY
IRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNT
IYRHYARSSKQVLWFWQLIKEMDNEKRMRLLQFVTGTCRLPVGGFADLLGSNGPQKFCIE
KVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcgttgctaaaccaggccctgggaatggctaccccatgaaggcacaactg
caaatcatggtgctatcagcaaaactgaaagaaaacaggaagaactggtttggtcccagt
ccatatgttgaagtggcagttgatggccagtccaaaaagacagagaaatgcaacaacacc
cacagtcccaaatggaagcagccgctaacagtaattgtcactccttttagcaagctaatc
ttccgagtatggagtcaccagaccttgaagtcggacataatgttaggcatggcaactctg
gaggtcagcgaaacactcaaagccaacgacatgaaaatctctgaggtggtgcagacgctg
cagctgagtgcagacagagaccagacagatgttgtgggggacctgtctgtctgtctggat
ggcatgcaagtggacccagagatgtttgcctctgctgccgaggctaacacccaaagtaca
tcgaatggggaatcgcaacagaatggggatgatgtgaggcggagtagagacggctctcct
tctctggatggtttggagcacagagcttccccaaatggtcgtgtggtcacagtgaatggc
acagggtcttgcaaagggtctccctctctgtcagcagggggctccaggggtaatcctcta
cggccccccaggccctctcgaccccctccacccaccccgcgcagaccaacctcctctcca
gcagcatcctctaatggatccattccaactgaagaaagtgatggccccagcatagagacc
ccagtctgcacacctgcagtaccagccccagaccctaacgccccaccccctacacacgac
cagagccaagcaatagcagccagccaagcagacagtgtaaccccaggaccccccagagcc
cccgctgtcgccgcaggcccattgcctcctggatgggagcagagggtggatcagaatgga
aggctgtatttcgtagatcatgtggaaaagaggacagcgtgggagcggcctgagcctcta
ccttctgggtgggagagacgagtggaccccatgggcagggtctactttgtagaccacatc
acgagaactaccacatggcaacggcccaccatggagacggtacggaactatgaacagtgg
cagcaccaacgcaaccagctacagggtgccatgcagcagttcaaccagcgcttcatattt
ggagtgaatgggctccaggaccaggttccagccactgagaacaagcagtttgatcccctg
ggcccactgccacatggatgggagaaaagaactgacagcaacgggagagtgtactttgtc
caacacaccacacggactacacagtgggaggaccctcgcactcaggggctgctgaatgag
aagcctcttccagagggctgggagatgaggttcacggtcgacggcatcccatactttgtg
gaccacaacaggagagccactacgtacatcgaccctcgcactggaaaatcctcacttgaa
aatgggccccagattacttacgttcgagactttaaagccaaagtccagtacttcagattc
tggtgccagcaattgtcaatgcctcagcacataaagatcactgtcacccgcaaaaccttg
tttgaggactcgttccagcaaataatgagcttcaatgcacaggacctccgcaggagacta
tggatcatattccctggggaagaaggccttgattatggaggggtggcaagggagtggttc
ttcctgctctctcatgaggtgctgaaccccatgtattgcctgtttgagtatgctgggaag
gacaactactgcctgcagatcaatcctgcctcctacatcaaccctgaccacctcaagtac
ttcaaattcatcggacgcttcatcgccatggctcttttccacgggaagttcattgacaca
ggcttttcactgccgttctacaagcgcatgctgaacaagccatgggcactaaaagatcta
gagtccattgacccagaattctacaattctctcatctggattaaggagaacgatatcgag
gagtgtggcctggagatgtacttctctgtggacaaagagattctgggtgaaatcaccact
catgagcttaagccggatggaggagaggtcctggtcactgaggagaacaaggaggagtat
atcaggcttgtagcagagtggaggttgtccagaggtgtggaggagcagacccaggccttc
tttgagggcttcaacgaggtcctcccacagcagtacctgcagtactttgacgccaaagaa
cttgaggtgatgctgtgtgggatgcaggagatcgacctggcagactggcagaggaacacc
atctacagacactatgcacgcagcagcaagcaggtcctctggttctggcagctcatcaaa
gagatggacaacgagaagcggatgaggctcctccagttcgtcacaggcacctgccgcctt
cctgtcggaggctttgctgacctattggggagcaatggcccacagaagttctgcatcgag
aaggtgggaaaggagaactggctacccagaagtcacacctgcttcaatcgattggatctg
cctccttacaaaagctacgagcagctgaaggagaaattgatgtttgcgattgaagagacg
gagggctttgggcaggagtga
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