| Entry |
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| Name |
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
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| KO |
| K04853 | voltage-dependent calcium channel L type alpha-1F |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
| cclu04261 | Adrenergic signaling in cardiomyocytes |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121546475
04020 Calcium signaling pathway
121546475
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121546475
09153 Circulatory system
04260 Cardiac muscle contraction
121546475
04261 Adrenergic signaling in cardiomyocytes
121546475
04270 Vascular smooth muscle contraction
121546475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:cclu04040]
121546475
Ion channels [BR:cclu04040]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121546475
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
30:complement(20771190..20801584)
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| AA seq |
2065 aa
MHVRPFDIFILLAIFANCVALGVSKPFPEEDSNSTNHNLEQVEYVFLVIFTIETFTKILA
YGLVMHPSAYIRSGWNLLDFVIVVVGLFSVVAEGTADHKPGEAHHAAGKPGGLDVKALRA
FRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGLLVMFVIIIYAIIGLELFLGRMHKTC
FYMGTELNVDDDPTPCAFAGNGRDCVGNGTECRGPWEGPNGGITNFDNIFFAMLTVFQCI
TMEGWTDVLYWMNDAIGFEMPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAVARGE
LQDAQNKKQMEEDMCGYMDWLIEAEDVDEEGNKRAAVAKKKMMKKFGWYKHSEDGESDSD
SEFEAYLDDDNGCCASLMAKMMANSFCEQLCQLNHAFRKNCRVAVKSQNFYWLVLVLVFL
NTAASASEHYGQPKWLTEMQERANKILLMLFTLEMLLKMYSFGFQIHFMALFNRFDCFVV
CGGILETVLVELEIIPPIGISVLRCVRLLRVFKVTRHWAALSGLVNSLLNSMKAICSLLL
LLFLFLIIFSLLGMQLFGGKFNFDETQMKRSTFDTFPQALLTCFQILTGEDWNAVMYDGI
MAYGGPVFPQMIVCIYFVSLFVVGNYILLNVFLAIAVDNLAGGDGGKKQVEEKKDDEEDW
DEDEDKEEDAANEMDDWEENEELRAIEGLEGIMPVKPESAPKEKIEPIPDGSSFFILGKR
NCLRVACHNLIHHSYFTNLILVFIIASSISLAAEDPIRAHSFRNNMLGYADYAFTSIFTV
EIILKVTVFGAFLHPGSFCRNAFNLLDLLVVSVSLASFFLHSSAISVVKIFRVLKVLRPL
RAINRAKGLKNVVQCVFVAIKTIGNILIVTTLLQFMFACIGVQLFKGRFYSCTDEAKHTP
YECMGTFVVYKDGDMNHPMVRERIWQNSEFNFDNVLQGMLALFTVSTFEGWPQLLYKAID
ANAANHGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGESEFKNCELNKNQ
RQCVQYALKAKPIKIYIPRNPSQLKFWKIIASSQFEYIMFVLILLNTLTLAVQHYEQSKT
FNAVMDILNLIFTALFTIEMIIKLLALRTHQYFIDAWNSFDALIVVGSVLDIMVSELSGG
DEDIEAIEAAAKAAAVAVPGAPPVAKKESGKVSITFFRLFRVLRLVKLLSKGEGIRTLLW
TFVKSLQALPYVGLLIAMIFFIYAVIGMQTFGKIAIDDNSHINRNNNFQTFFMSVLLLFR
CATGEQWQEIMLAALPGRPCDPESDFEPGDDNMCGSNLAYIYFISFFMLCAFLIINLFIA
VIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEATGRIKHIDVVTMLRRIQPPLGFGKL
CPHRVACKRLVAMNVPLLSDGTVTFNATLFALVRTSLKIKTEGPVDQDNEELRAIIKKIW
KRTKPKLLEEVIPPPRGEEVTCGKFYASFLIQDYFKKFRKRKERERKKKGKDKKDSLQAG
LRSLQALAPELHLALAMEGEDEEGVEGELDEEFFKNDNVFEDPGTSATNTPSTTHMPADM
EEGTTTVFMEPFVEPTISSDVVTEQPLTVSEKPESALSSFDVVMEQPTRSEALPPLEEAP
APPPPQPAPAASPPKDPSPPQPAPAANPPNAPSQPQPAPVASPPQVVAQSPPQIVLAPPE
PEAPQIVLEAAPAPPQPEPVMEGRGGETSTKQQVYYPQYPVGMPTNNGHVYQEQPAASLI
PSEYMQSPTPNFTNGRAAGVPYANGNGMNGNVYNGSMNGGSMNGGSAIGSSMSGYTGNGY
NGNGYNGNGYNGNGNGNGLEQYVRRRVLPPTPAGRKPPSFNIQCLRAQHSVDDIPIPGTY
ESNSPPCRSRLTLDSRRSSVSSMSSASWANNGGGPAGSTPGAGVSAASSAAAKRGRLLYA
PLMLVDEARGTQQVWGDRTQATSSLPAIATRPSGWYPGAPTLPVPTPQNRSYTNGRVPSQ
ISQSLIEKGSADSLVESILISEGLGLYARDPKFVNFAKREIADACNMTIDEMENAATDLL
TRSAGQPIGRFEEELADEMNCVISY |
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| NT seq |
6198 nt +upstreamnt +downstreamnt
atgcatgtcagaccttttgatattttcattctacttgctatctttgccaactgtgtggcc
ctgggtgtatctaaacccttcccagaggaggactccaattccaccaaccacaacttggaa
caagtagagtacgtcttcctggtcatcttcaccattgaaaccttcactaagatcctggct
tatggcttggtcatgcaccctagcgcctacatccgcagtggctggaatttgcttgatttt
gtcatcgttgtcgtcgggttgttcagtgtggttgctgagggcacagccgaccacaagcct
ggagaggcccaccacgcagcaggcaaaccaggaggactagatgtcaaagctctcagagcc
ttcagggtgctgcgaccccttaggctggtgtctggtgtgcccagtctccagattgtcttg
aactccatcatgaaagccatggttcccctgctccacattggtctgctggtcatgtttgtc
atcatcatctatgccattatcggtctggagctcttcctcggcaggatgcacaagacctgt
ttctacatgggcacagaactgaacgtggatgatgaccccacaccgtgtgcgtttgctgga
aatgggcgcgattgtgtgggcaatgggacagagtgcagaggaccgtgggaggggcctaat
ggcgggatcactaattttgacaacatattttttgccatgctgactgtgttccagtgtatc
accatggagggctggaccgatgtgctatactggatgaacgatgcaataggctttgagatg
ccctgggtgtactttgtctctctggtcatatttggctcgtttttcgtactcaaccttgta
ttgggagtgttgagcggcgagttctccaaggaaagagagaaggctgtggctcgtggagag
ctgcaggacgcccagaataagaagcagatggaggaggacatgtgtggctacatggactgg
ctcatcgaggccgaggatgtggatgaggaaggaaataaacgtgctgctgttgccaagaag
aaaatgatgaagaagtttggctggtataaacacagcgaggacggagaatcggattcagac
tctgaatttgaagcatatctcgatgacgacaatggctgctgcgcatctcttatggctaaa
atgatggccaacagtttctgtgaacagctatgccaactgaaccatgcctttcggaagaac
tgtcgtgtagcagtcaaatcccagaacttctactggctggtgcttgttctggtgtttctc
aacactgcagccagtgcctctgaacactacggccagcccaagtggctcactgagatgcag
gagcgggccaataagatcctgttgatgttgttcacgctggagatgctgttaaagatgtac
agtttcggtttccaaattcacttcatggctctgtttaaccgcttcgactgcttcgtggtg
tgtggtggcatcctggagacggtcttggttgagttggagatcatccctcccatcggcatc
tctgtgctgcgctgcgtccgcctgctcagggtgttcaaagtcacacggcactgggcagcc
ctgtcaggcctggtcaattcactgctcaactccatgaaggctatctgctccctgctgctc
ctgctcttcctcttcctcatcatcttctccctgctggggatgcagctgtttgggggcaaa
ttcaactttgatgagactcagatgaagagaagcacgttcgacactttcccccaggccctg
ctcacctgcttccagatccttacaggagaggactggaatgctgtaatgtatgatgggatc
atggcttatggcgggccagtcttcccacagatgattgtgtgtatctatttcgtctccctc
tttgttgtcggcaactatatcctgctcaatgtcttcttggctatcgctgtggacaacttg
gcaggtggagatggtggaaaaaagcaagtagaagagaaaaaggatgatgaagaggactgg
gacgaagatgaagacaaagaggaagatgcggcgaatgagatggatgactgggaggagaat
gaggagttgagagccatcgagggtctggagggaatcatgcctgtgaagcctgaatccgct
ccaaaagagaagattgaacccattccagatgggagctccttcttcattcttggaaagaga
aattgccttcgagtggcctgtcacaatctcatccaccactcctacttcaccaacctcatc
ctcgtcttcatcatcgccagtagtatttctctggccgctgaggatccaatcagagctcac
tcctttaggaacaacatgcttggctacgctgattatgcattcacttccatattcactgtg
gaaatcatactgaaggtgacggtttttggtgcattccttcatcctggctccttctgtagg
aatgccttcaacctcctggacctgctggttgtcagtgtgtctctcgcgtccttcttcctc
cattccagcgctatctctgtggtcaagattttcagggtactcaaagtgctcaggcctctc
cgagccatcaacagagccaagggactcaagaatgtagtgcagtgcgtgtttgtggcaatc
aaaaccatcggaaacatcttgatcgtcacgacgctcctccagttcatgtttgcttgtatt
ggagtgcagctcttcaagggcagattctacagttgcaccgatgaagctaaacacactcca
tatgagtgcatggggacgtttgtggtgtataaggacggtgatatgaatcaccctatggtg
agagagaggatatggcaaaacagtgaattcaactttgacaatgtgctgcagggcatgctg
gccctgttcactgtgtctacatttgaaggctggccacagctgctgtacaaggccattgac
gccaatgctgcgaaccacggccctatctacaactaccgtgtggaaatctccatattcttc
atcatctacatcatcatcatcgccttcttcatgatgaacatcttcgtgggtttcgtcatc
atcactttccgtgaacagggagaatccgagttcaaaaactgcgaactgaacaaaaatcaa
agacagtgtgtacagtatgctctgaaagccaagcccatcaagatctacattcccagaaac
ccgtcccagctaaagttctggaagatcatcgcctccagccagtttgagtacatcatgttt
gtcttaattcttctcaacaccctcaccttggctgtacagcattatgagcagtctaaaaca
ttcaatgctgtgatggacatcctcaacttgatcttcactgccctatttaccatagagatg
atcatcaagctactggcgctcagaacacatcaatatttcattgatgcttggaactccttt
gacgctctgatcgttgtgggcagtgtgctagacatcatggtctcagagcttagtggagga
gacgaggatattgaagcaatcgaggctgcagccaaagccgcagctgtagccgtacccgga
gctccacccgtggccaagaaggaaagcggaaaagtgtccatcacattctttcgtttgttc
cgagtcttgcgattggtcaagctgctcagcaaaggggagggcattcgaaccctcctctgg
acttttgtcaagtccctccaggccttaccatatgtcggtctacttattgcgatgatcttc
ttcatctatgctgtgattggcatgcagacgtttggaaagattgctatagatgacaactcg
catatcaacaggaacaacaacttccagaccttcttcatgtctgtcctgctgctcttcagg
tgtgccaccggagagcagtggcaggagatcatgttggcagcgttgccagggagaccctgt
gaccccgagtcagactttgagcccggggatgacaacatgtgcggcagcaacctggcctac
atctacttcatcagtttcttcatgctctgcgctttcctgatcattaacttgttcattgct
gtcatcatggacaactttgagtacctgaccagagattggactgtactgggtactcatcac
ctggacgagttcaaacgagtctggtcggattatgacccagaggccacgggtcgaatcaaa
catatcgatgtggtcactatgctgcgcaggatccagccaccccttggttttggcaaactg
tgcccccatcgtgtggcctgcaagaggctggttgctatgaacgtgccgctgctcagtgac
gggacagtcaccttcaatgccaccctgtttgcgctagtcagaacctcactcaagatcaag
accgaggggcctgttgaccaggacaatgaggagctcagggccatcattaagaagatatgg
aagcgcactaagcccaagctccttgaagaggtaattccaccccctagaggggaagaggtg
acttgtgggaagttctatgccagcttcctgatccaggactactttaagaagttccgcaag
aggaaggagagggagaggaagaagaagggaaaggacaagaaagactctctccaggcaggg
ctcaggtcactgcaggcactggccccagagttgcatctggccttggcaatggagggagag
gatgaggagggtgtagagggagagttggatgaagagttcttcaagaatgacaacgttttc
gaagatcctggcacctctgccacaaatactccatccaccactcacatgccagctgacatg
gaggagggcaccaccactgtcttcatggagcccttcgtcgagcccacaatatccagcgac
gtggtcacagaacagccattgacagtcagcgagaaaccagaatcagctctctcatccttt
gatgtagtgatggaacagcccacaagatctgaggccctccctccactagaagaagcacca
gccccacccccgccccaaccagccccagccgcatcaccaccaaaagatccatcccctccc
caaccagcaccagccgcaaacccaccaaatgccccatcccaacctcaaccagccccagtt
gcttctccgccacaggtggttgctcaatccccacctcaaatagtgttagccccaccagaa
ccagaggcacctcaaatagtgttagaggcagcccctgccccacctcaaccagagccagtg
atggagggaagaggaggtgaaacttccactaaacagcaggtgtactacccacagtaccca
gtgggcatgccaacaaacaacgggcatgtgtatcaagagcaacctgcagcatcccttatc
ccgtcagagtacatgcagagtcctactcctaacttcaccaatgggagagctgcaggagtg
ccctacgccaatggaaacggcatgaatgggaacgtctacaatggcagtatgaatggaggt
agcatgaatggaggtagcgccatcggaagtagtatgagtggctacactggcaatggttac
aacggaaatggctacaatggaaacggctacaatggcaatggcaacggtaatggattggag
caatatgtccggagacgtgttcttcctcctactcctgcaggtcgtaagccgccctccttt
aacatccagtgtctgagggcacagcatagcgtggatgacatccccatccctggcacgtac
gagagtaactcacccccatgcagatccagactgacccttgactcccgccgcagcagtgtc
tcctccatgtcctcggcctcctgggccaacaatggaggaggacctgcagggtcgacacca
ggagcaggggtgtcagcagcatcatcagcagcagcaaagagagggcgtctgctctacgcc
cctctgatgctggtggatgaggccaggggcacccagcaggtgtggggagacaggacccag
gccacctccagtctccctgctattgcaaccaggcccagtggctggtaccctggagccccg
acactccctgtgcccacgccccagaacaggagctacaccaatggcagggtgccctcccag
atcagccagagcctcatagagaagggcagtgcagacagcctggtggaatcgatcctgata
tcggaaggcttgggcctctatgcaagagacccaaagtttgtgaacttcgccaagcgagag
atcgcggacgcatgtaacatgaccattgatgagatggagaacgcagctacagacctgctg
acccgttcggcgggccagccaataggacgcttcgaggaggagctggctgacgagatgaac
tgtgtgatttcctactga |
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