Coregonus clupeaformis (lake whitefish): 121547243
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Entry
121547243 CDS
T08357
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121547243
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121547243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547243
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121547243
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Others
121547243
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121547243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
121547243
NCBI-ProteinID:
XP_041714344
LinkDB
All DBs
Position
31:23982151..24015788
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AA seq
1076 aa
AA seq
DB search
MLATQTPDTWPEAKDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCCALEAVF
VHGIKSKYVRSKSGGCDRKGGSRGSLPQPVFWSLLKTVTHGDVITELEKLSFVGTDVGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPTALLLDPEEREVLLSYIQGLASLIFNL
SYKSAVLNEWTTTPLALAGLCPATQADGLDLPGLTKSKESWDTVSQSSGGSDMVEVQQEG
LGVLGRGIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
ESSAKLENNGNAKRPLKDVLADFRESANSSQDSMREDSYVSTPGADHLSENTAFSGSDSE
TQGPFTPLTGSSNPASVGSDQEEPSTETHVPSEVHFDVPAEVYSHNEVPSSHSDCVERTA
TTPHLPVTETPREKKTEDSAKSTSEPSAHTNLPRTTSVLSRRVSTDSITHSHSWISEDDI
YKPHLEQLVDPDESLLRSGPACVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKL
GHLERRGAVGMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDARITSAEGRFDLAF
PGKRLYLRAANHDEAEDWVDRIAEAVNKCRPLHCLDDHSEVLQPTDSSVILEEPPKSSPS
SPSVPTSPERGGTAVEQQEQQPPLELDWTRPTDPESDAIKEAVLYLSQEAEARNWTPLVF
SLSLETLNGFRVQDGRKVLQCSHPIEGIRDVVPDVSLGGPAFFRVVTTRDTLKLRAKSPE
EARAWRGLIRGALDSFLESREDGEPDSPGLAPGAGGNIHRLMQHRLKGDGVLLAHLCTVP
TEKGLDLQGFKCAGCPKPVGVSRGKARLCEFSGKYYCDSCHQGDAIAIPSRMVHNWDLTP
REVSRQALKLLSQIEHEPLFNLHLLNPDLLEHVEAMAQAHSLRQRLQLLGNYLLTCRSGA
CKNIQARLGLRTYLLESSHLYSVMDLQQIAEGTYEAYFNMLIRFASNHIQQCDHCTQKGY
ICQNCHASDIIFPFQFDTTARCKECKAMFHATCKAQSPSCPRCLRLQRYLERDLQD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacgtggccagaggcaaaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctcttcagaagcgctacgtgatgaccgatgcc
gtggtaaccagcgaggatggtgatgccaacctgctgtgctgcgccctggaggctgtcttt
gtccacggcatcaagagcaaatatgtccgctccaagtccggaggatgtgacaggaaaggg
gggtcccggggatccctaccccaacctgtgttctggagccttctcaagacggtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacgtgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacctggcctccctg
ttccgtgagggctccaaactgcaggcccactaccagcccaccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctgatcttcaacctt
tcgtacaagtcggccgtgctcaacgagtggaccaccacccctctggctctggccggcctc
tgccccgccacccaggctgacggtctcgacctccccggtctcaccaaaagcaaggaatcc
tgggatacggtgtcgcagtcatccggcgggtcagatatggtcgaagtgcagcaagagggg
ttaggggtgctggggagggggattgggggtgtctcagggggtaggacccctctgaattct
tctaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcagac
agtctgctgcagggtcacgaccccaagagcccagacaaggagccctggccatgtgacctg
gagagctccgccaaactggagaacaatggcaatgccaagaggcctcttaaagatgttctg
gcagacttcagggagagtgccaactccagtcaggactccatgcgcgaggattcgtacgtt
tccactccgggcgcagaccacctctcagagaacacggccttcagcggctctgatagcgag
acccaggggccattcacacctctcactggctcttctaaccctgcttcagtggggtcagac
caggaggaaccttccactgagacccatgtcccttccgaagtgcactttgatgtccccgcc
gaagtgtactcgcacaatgaagtgccctccagtcacagtgactgtgtggagagaacagcg
acaactcctcacctgcctgtcacagagacgccacgggagaaaaagaccgaagattctgct
aagagcacctcggagccttcagcccacacgaacctaccccgcactaccagcgtgcttagc
aggagggtgtctacagactccatcacacattcccactcctggatctctgaggatgacatc
tataagccacaccttgagcaactggttgaccccgatgagtctttgctacggtctggccca
gcttgtgtgaacggattgacctctccccccccagagcccgagaccccccagtctcccccc
agcgtggttcaccgcaggcagataggcctgtccaaccctttccgtgggctgctgaagctg
ggccatctggagcggcggggcgcagtgggcatgtggcgcgactactactgcgagctctcg
cccttcgagttccgcctctacctgaatgcagaggagcgcacctgctgtgacaactgctcc
ctgctgcgttgcgaagacgcccgcatcacctcggccgagggccgcttcgatctggccttc
cccgggaagaggctctacctgcgggcagccaaccacgacgaggcagaggactgggtggac
cgcatcgccgaggccgtcaacaagtgccgcccgctgcactgccttgacgaccattcagag
gtgctgcagcccactgacagcagtgtcatcctggaagagcccccaaaatcttccccttcg
tccccctccgtacccaccagtcccgagcgagggggtactgcggttgagcagcaggagcag
cagccgccacttgagctagactggacgcgtcccacagaccctgagtcagacgccattaag
gaggcggtgctgtacctatcccaggaagcagaggctcgcaactggactccgctggtcttc
tccctctccttagagactctcaatggcttccgggtgcaggatgggcggaaggtgctgcaa
tgttcccaccccatcgaggggatacgggacgttgtcccagacgtttctctggggggacca
gccttctttagggttgtaacgaccagggatacgctcaagctgagggccaagagccctgag
gaggcgcgtgcctggaggggcctcatcaggggagccctggactccttcctggagagtcga
gaggacggggagcctgatagccccgggttagcccctggggcaggggggaacatccacaga
ctgatgcagcatagactaaagggggacggggtgctgctggcccatctatgtacagtaccc
acagagaaggggctggaccttcagggcttcaagtgtgcaggttgtccaaagccggtgggg
gtctcccggggaaaagccagactgtgcgagttctcagggaagtactactgcgactcttgt
caccagggtgacgccatcgccataccctcccgcatggtgcacaactgggacctcacgcct
cgagaggtctccagacaggcccttaagctgctgtctcagattgaacatgagcccctgttc
aaccttcaccttttgaaccctgacctgttggagcatgttgaggccatggcccaggcacac
agcctcagacagaggctgcagcttctaggaaactacctgctcacctgccgcagtggggca
tgcaaaaatattcaggccagactgggcctaaggacatacctgttagaatcaagccatctc
tatagtgtcatggacttacaacagatagcggagggaacatatgaggcctactttaatatg
ttgatccggtttgcctccaaccacattcaacaatgtgaccattgcacccagaagggctac
atctgccagaattgtcacgccagtgacatcatcttccccttccagtttgacaccaccgcc
aggtgtaaagagtgtaaggcaatgtttcacgcgacctgcaaggcccagtcgccctcctgt
ccacgatgcctgcgtcttcagcggtacctcgagagagatctgcaggattaa
DBGET
integrated database retrieval system
